Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU6-44P-201ENST00000384045 107 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU6-160P-201ENST00000384591 107 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 MIR515-2-201ENST00000384883 83 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 MIR515-1-201ENST00000384884 83 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.56□□□□□ -1.84
USP17L3A6NCW0 AC087499.2-201ENST00000432861 149 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU1-131P-201ENST00000458943 161 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU6-341P-201ENST00000516973 96 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP17L3A6NCW0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.56□□□□□ -1.84
USP17L3A6NCW0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 RNA5SP323-201ENST00000391094 133 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 RNA5SP467-201ENST00000391274 118 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 RNU6-1064P-201ENST00000410626 104 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 RNA5SP127-201ENST00000411051 133 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 AL158823.1-201ENST00000418441 478 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 SNRPGP10-201ENST00000432323 225 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 AC009238.1-201ENST00000442165 424 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 AC009237.6-201ENST00000446969 424 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 RNU6-504P-201ENST00000516568 104 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 AL358944.1-201ENST00000528537 144 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 MIR3945-201ENST00000581853 98 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 AL365205.2-201ENST00000594586 68 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 U4atac.1-201ENST00000618345 95 ntBASIC3.55□□□□□ -1.84
USP17L3A6NCW0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
USP17L3A6NCW0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP17L3A6NCW0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP17L3A6NCW0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP17L3A6NCW0 AC009487.2-201ENST00000420969 6821 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 RNU4-82P-201ENST00000362443 140 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 MIR624-201ENST00000385217 97 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 AL603914.1-201ENST00000401964 204 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 RNU2-52P-201ENST00000410680 190 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.54□□□□□ -1.84
USP17L3A6NCW0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 RNU6-772P-201ENST00000516042 105 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 AC007536.1-201ENST00000533382 349 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
USP17L3A6NCW0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.54□□□□□ -1.84
USP17L3A6NCW0 AC092435.3-201ENST00000565538 3654 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.66-201ENST00000362862 102 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 SNORA9.2-201ENST00000365361 133 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.525-201ENST00000384570 113 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 RNU6-476P-201ENST00000384726 107 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 MLLT10P1-201ENST00000418346 262 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 RNU7-94P-201ENST00000459576 63 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 YWHAEP4-201ENST00000505390 198 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.53□□□□□ -1.84
USP17L3A6NCW0 MRPS17P9-201ENST00000511924 393 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 AC079600.2-201ENST00000550076 130 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 AC087685.1-201ENST00000587507 141 ntBASIC3.53□□□□□ -1.84
USP17L3A6NCW0 ZNF271P-202ENST00000465539 1970 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 Y_RNA.280-201ENST00000364765 112 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 SNORA26.7-201ENST00000391288 122 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 RPL32P35-201ENST00000415214 394 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 AL158147.1-201ENST00000443970 75 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 AC024995.1-201ENST00000523014 93 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 AC007751.1-201ENST00000529260 376 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 U6.95-201ENST00000636931 70 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 MIR3914-2-201ENST00000637339 95 ntBASIC3.52□□□□□ -1.85
USP17L3A6NCW0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USP17L3A6NCW0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP17L3A6NCW0 SNORA12.1-201ENST00000390873 148 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 AL159169.1-201ENST00000421119 127 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.51□□□□□ -1.85
USP17L3A6NCW0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 RNU1-104P-201ENST00000517280 175 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 MIR3121-201ENST00000579680 77 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.51□□□□□ -1.85
USP17L3A6NCW0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP17L3A6NCW0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP17L3A6NCW0 Y_RNA.52-201ENST00000362760 96 ntBASIC3.5□□□□□ -1.85
USP17L3A6NCW0 Y_RNA.114-201ENST00000363265 113 ntBASIC3.5□□□□□ -1.85
USP17L3A6NCW0 SNORA8-201ENST00000384574 139 ntBASIC3.5□□□□□ -1.85
USP17L3A6NCW0 CST2P1-201ENST00000425770 87 ntBASIC3.5□□□□□ -1.85
USP17L3A6NCW0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms