Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC011604.1-201ENST00000545978 196 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 MIR4769-201ENST00000584126 77 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 Z83818.1-201ENST00000603584 150 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 AP003357.1-201ENST00000604497 148 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 U4.3-201ENST00000621047 82 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.572-201ENST00000384757 98 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR515-2-201ENST00000384883 83 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR515-1-201ENST00000384884 83 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 RNU11-5P-201ENST00000391216 129 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 AL355497.1-201ENST00000406262 551 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR1283-2-201ENST00000408621 87 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 COX6CP10-201ENST00000416832 224 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 UQCRHP3-201ENST00000451503 251 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 RN7SL75P-201ENST00000461926 281 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 AC022559.1-201ENST00000520905 205 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 IGKV3-31-201ENST00000523109 329 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR4724-201ENST00000579485 89 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 AC004792.1-201ENST00000614523 137 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 MIR6079-201ENST00000635807 62 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 U6.108-201ENST00000637764 58 ntBASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-653P-201ENST00000363074 106 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-144P-201ENST00000383951 107 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 RNU4-53P-201ENST00000410828 140 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 AC107393.1-201ENST00000512403 346 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 RNU7-128P-201ENST00000517247 62 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 AC127455.1-201ENST00000565496 145 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 AL929325.1-201ENST00000603096 117 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 AC022513.1-201ENST00000624512 117 ntBASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC163A0A0D9SF12 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-969P-201ENST00000383900 105 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-1080P-201ENST00000383982 107 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 SNORA72-201ENST00000384339 132 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 MIR520G-201ENST00000385064 90 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNA5SP465-201ENST00000391195 109 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6-437P-201ENST00000459408 95 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNVU1-2-201ENST00000516326 135 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 RNU2-19P-201ENST00000517288 84 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 AC024995.1-201ENST00000523014 93 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 MIR5694-201ENST00000581190 76 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 AC018630.2-201ENST00000534866 2403 ntBASIC2.63□□□□□ -1.99
CCDC163A0A0D9SF12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 RNU4-17P-201ENST00000365598 141 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 MIR1278-201ENST00000408753 81 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AC055731.1-201ENST00000474387 401 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 Y_RNA.700-201ENST00000516806 100 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AC084364.2-201ENST00000546924 395 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 MIR4648-201ENST00000580107 72 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AC069114.2-201ENST00000604699 304 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 AC093831.2-201ENST00000624393 3427 ntBASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC163A0A0D9SF12 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNU4-41P-201ENST00000364426 143 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 Y_RNA.785-201ENST00000384290 109 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 MIR626-201ENST00000385032 94 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNA5SP109-201ENST00000391010 116 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNU2-2P-201ENST00000410396 191 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 Z98742.3-201ENST00000418637 326 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 snoU13.23-201ENST00000458863 104 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 AC100767.1-201ENST00000528178 123 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 MIR4308-201ENST00000580634 81 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 RNU2-4P-201ENST00000606190 192 ntBASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC163A0A0D9SF12 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC163A0A0D9SF12 RNU4-70P-201ENST00000384579 139 ntBASIC2.6□□□□□ -1.99
CCDC163A0A0D9SF12 RNU2-7P-201ENST00000410794 178 ntBASIC2.6□□□□□ -1.99
CCDC163A0A0D9SF12 RNA5SP501-201ENST00000410990 112 ntBASIC2.6□□□□□ -1.99
CCDC163A0A0D9SF12 CBX3P4-201ENST00000538909 354 ntBASIC2.6□□□□□ -1.99
CCDC163A0A0D9SF12 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC163A0A0D9SF12 Y_RNA.150-201ENST00000363562 102 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms