Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-480P-201ENST00000384332 107 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AL358934.1-201ENST00000432346 324 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 MTND3P1-201ENST00000441336 220 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AC091179.3-201ENST00000474761 144 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-758P-201ENST00000516292 89 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 Z94722.1-201ENST00000604328 474 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AL359999.1-201ENST00000604513 294 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 AL590491.3-201ENST00000610731 82 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 uc_338.28-201ENST00000612082 187 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORD114-11-201ENST00000363738 75 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 RNA5SP368-201ENST00000364298 116 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORA63C-201ENST00000364578 129 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-811P-201ENST00000384069 107 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORD28-201ENST00000384706 75 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORD73A-201ENST00000386062 65 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR1257-201ENST00000408490 117 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 Z95118.1-201ENST00000421372 247 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AC090844.1-201ENST00000422019 156 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4432-201ENST00000581823 84 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4436A-201ENST00000585278 85 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AL512506.1-201ENST00000613918 449 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR6740-201ENST00000618268 113 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.8□□□□□ -2.54
TRAV1-2A0A0B4J238 AL589826.1-201ENST00000340697 249 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 RNY1P12-201ENST00000364251 105 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORD50B-201ENST00000364995 70 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORA20.2-201ENST00000383922 131 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-136P-201ENST00000384663 107 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 AL022718.1-201ENST00000412004 84 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 HMGN2P32-201ENST00000444648 269 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-329P-201ENST00000459618 107 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 AP001328.1-201ENST00000528550 176 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR3684-201ENST00000579779 74 ntBASIC-0.81□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORA25.7-201ENST00000364375 127 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-784P-201ENST00000384330 106 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 MTCYBP4-201ENST00000401524 249 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-757P-201ENST00000410334 100 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 MCFD2P1-201ENST00000417812 300 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 SCARNA18-201ENST00000459004 134 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU7-167P-201ENST00000459160 62 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC016550.1-201ENST00000505348 785 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC010486.3-201ENST00000511602 785 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU2-13P-201ENST00000515909 113 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-830P-201ENST00000516353 107 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-135P-201ENST00000516769 101 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC006600.1-201ENST00000572529 153 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4636-201ENST00000582271 80 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AC005771.1-201ENST00000585581 349 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4791-201ENST00000607666 84 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 AL158209.2-201ENST00000619266 216 ntBASIC-0.82□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-74P-201ENST00000384235 107 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MTATP6P20-201ENST00000414147 562 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MTCO2P27-201ENST00000420740 428 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AL365184.2-201ENST00000431139 435 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 HSPE1P23-201ENST00000509838 286 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 SNORD27.1-201ENST00000516319 72 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 NAMPTP3-201ENST00000569273 224 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR5706-201ENST00000579841 80 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4677-201ENST00000584153 80 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR4639-201ENST00000584938 69 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC087685.1-201ENST00000587507 141 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC125232.2-201ENST00000592457 143 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC108676.2-201ENST00000605225 163 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 MIR8066-201ENST00000617280 78 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 uc_338.11-201ENST00000619132 160 ntBASIC-0.83□□□□□ -2.54
TRAV1-2A0A0B4J238 AC134878.1-201ENST00000619901 243 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms