Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USP16Q9Y5T5 RNA5SP361-201ENST00000362686 118 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 Y_RNA.112-201ENST00000363250 102 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 SNORA75.6-201ENST00000391318 127 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 RNA5SP475-201ENST00000410568 110 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.16□□□□□ -2.22
USP16Q9Y5T5 AC005002.2-201ENST00000438228 269 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 SNORA40.9-201ENST00000515895 93 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 RNU7-172P-201ENST00000517125 64 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 AC023157.2-201ENST00000540596 141 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 AL442163.3-201ENST00000554110 156 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 MIR3674-201ENST00000636576 68 ntBASIC1.16□□□□□ -2.22
USP16Q9Y5T5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USP16Q9Y5T5 RNU6-874P-201ENST00000362390 105 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 SNORD81.2-201ENST00000365153 76 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 SNORA69.1-201ENST00000390904 137 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 ELOCP21-201ENST00000412558 336 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 PDCL2P1-201ENST00000419302 352 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.15□□□□□ -2.23
USP16Q9Y5T5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.15□□□□□ -2.23
USP16Q9Y5T5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC144568.1-201ENST00000520139 137 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC027419.1-201ENST00000522976 328 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC113139.1-201ENST00000605049 239 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AL365434.2-201ENST00000607979 234 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 AC099654.14-201ENST00000638599 341 ntBASIC1.15□□□□□ -2.23
USP16Q9Y5T5 SNORA27.1-201ENST00000362604 124 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU6-1188P-201ENST00000363795 107 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU6-99P-201ENST00000364721 107 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU6-407P-201ENST00000365280 104 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 SNORA20B-201ENST00000384220 132 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU6-376P-201ENST00000384731 106 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU6-440P-201ENST00000390882 105 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MIR873-201ENST00000401120 77 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RAB28P5-201ENST00000427490 651 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 AL606517.2-201ENST00000442855 241 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 Y_RNA.653-201ENST00000459091 95 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MTND4P17-201ENST00000470444 350 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU7-28P-201ENST00000516759 62 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 RNU2-56P-201ENST00000516826 190 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 SNORA20.3-201ENST00000516880 132 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 DEFB108E-201ENST00000524692 240 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MIR1244-1-201ENST00000612829 85 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 AC073349.3-201ENST00000617616 186 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MIR1244-3-201ENST00000635744 85 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MIR1244-2-201ENST00000636449 85 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 MIR1244-4-202ENST00000636813 85 ntBASIC1.14□□□□□ -2.23
USP16Q9Y5T5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 SNORD114-7-201ENST00000362520 77 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 RNU6-1297P-201ENST00000384415 104 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 MIR7-2-201ENST00000384970 110 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 MTND4P28-201ENST00000426217 387 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 RNA5SP20-201ENST00000515976 84 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 SNORA31.10-201ENST00000516482 106 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 AL357075.2-201ENST00000614906 189 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 MIR6079-201ENST00000635807 62 ntBASIC1.13□□□□□ -2.23
USP16Q9Y5T5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
USP16Q9Y5T5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
USP16Q9Y5T5 RNU6-1301P-201ENST00000362724 104 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 RNU6-318P-201ENST00000384283 103 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 RNU6-310P-201ENST00000384655 107 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 SNORD12B-201ENST00000410433 91 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 AC022493.2-201ENST00000506122 481 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 SNORA70.12-201ENST00000516084 153 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 RNU6-559P-201ENST00000516151 98 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 RNU6-1213P-201ENST00000517075 94 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 AP002004.2-201ENST00000531656 154 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.12□□□□□ -2.23
USP16Q9Y5T5 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 AL390123.1-201ENST00000603216 237 ntBASIC1.12□□□□□ -2.23
USP16Q9Y5T5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 Y_RNA.384-201ENST00000383909 102 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 MIR520G-201ENST00000385064 90 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 MIR628-201ENST00000385229 95 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 AL355796.1-201ENST00000406706 323 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 RNU6-1156P-201ENST00000410365 100 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 Y_RNA.646-201ENST00000410980 101 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 AC138393.2-201ENST00000414742 246 ntBASIC1.11□□□□□ -2.23
USP16Q9Y5T5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms