Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR626-201ENST00000385032 94 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 HSPE1P9-201ENST00000440046 311 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR4635-201ENST00000583759 79 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 Z83818.1-201ENST00000603584 150 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 AC090425.1-201ENST00000610007 140 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR6895-201ENST00000613497 78 ntBASIC3.51□□□□□ -1.85
GTF3C3Q9Y5Q9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 RNU4-41P-201ENST00000364426 143 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR17-201ENST00000385012 84 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 snoU13.27-201ENST00000459278 104 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 HMGN1P7-201ENST00000491722 313 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR4709-201ENST00000577272 72 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 AC005000.2-201ENST00000605468 310 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 AC011921.3-201ENST00000605540 361 ntBASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.5□□□□□ -1.85
GTF3C3Q9Y5Q9 RNU6-200P-201ENST00000364743 107 ntBASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 MIR490-201ENST00000384865 128 ntBASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 AL138752.1-201ENST00000452964 351 ntBASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 AC021269.2-201ENST00000532318 330 ntBASIC3.49□□□□□ -1.85
GTF3C3Q9Y5Q9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 SNORA31.17-201ENST00000516953 127 ntBASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 RNA5SP437-201ENST00000517249 129 ntBASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 AC100767.1-201ENST00000528178 123 ntBASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF3C3Q9Y5Q9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 RPL30P13-201ENST00000418873 348 ntBASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 IGLV3-17-201ENST00000519099 244 ntBASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.47□□□□□ -1.85
GTF3C3Q9Y5Q9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-653P-201ENST00000363074 106 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR554-201ENST00000384874 96 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 AC130289.1-201ENST00000577321 73 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 AL020997.2-201ENST00000602607 184 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.46□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU4-17P-201ENST00000365598 141 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR218-2-201ENST00000385006 110 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 RNA5SP233-201ENST00000459153 113 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 RN7SL542P-201ENST00000467147 294 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 AC121758.2-201ENST00000553271 193 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR411-201ENST00000362239 96 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR126-201ENST00000362291 85 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.308-201ENST00000365043 101 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 SNRPGP10-201ENST00000432323 225 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 STAG3L5P-204ENST00000443759 179 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 SNORA31.10-201ENST00000516482 106 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR4713-201ENST00000582691 75 ntBASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-969P-201ENST00000383900 105 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-1031P-201ENST00000384773 107 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-383P-201ENST00000410864 94 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU7-34P-201ENST00000459394 64 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RN7SKP164-201ENST00000516138 266 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR4299-201ENST00000577899 72 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 AC039056.2-201ENST00000622261 511 ntBASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF3C3Q9Y5Q9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR21-201ENST00000362134 72 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 Y_RNA.297-201ENST00000364950 91 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 SNORA4.2-201ENST00000365313 147 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 RNU6-131P-201ENST00000391144 107 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 RPL23AP91-201ENST00000569211 455 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 MIR5092-201ENST00000583139 88 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 AC087685.1-201ENST00000587507 141 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 AL591926.4-201ENST00000616895 298 ntBASIC3.42□□□□□ -1.86
GTF3C3Q9Y5Q9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms