Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RPS27P22-201ENST00000478056 241 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 SNORA4.4-201ENST00000515921 135 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-667P-201ENST00000517186 102 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 AC109810.1-201ENST00000534066 224 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 U2.20-201ENST00000613956 192 ntBASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
PCDHA2Q9Y5H9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNU1-22P-201ENST00000363334 158 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNA5SP125-201ENST00000364843 120 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 MIR592-201ENST00000384959 97 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-239P-201ENST00000390990 99 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNA5SP210-201ENST00000391034 120 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-383P-201ENST00000410864 94 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNA5SP508-201ENST00000411327 119 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 AL162725.1-201ENST00000435405 301 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 RNU7-121P-201ENST00000516604 62 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 AC015720.1-201ENST00000565251 277 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 CTSLP2-204ENST00000629029 392 ntBASIC2.86□□□□□ -1.95
PCDHA2Q9Y5H9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-674P-201ENST00000363831 107 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-1228P-201ENST00000391014 107 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 RNA5SP320-201ENST00000516263 124 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 AC091544.4-201ENST00000555268 342 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 MIR4438-201ENST00000585271 93 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDHA2Q9Y5H9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 SNORD113-1-201ENST00000365321 69 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 SNORA25B-201ENST00000365507 128 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 MT-TT-201ENST00000387460 66 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 MIR1278-201ENST00000408753 81 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 RNU6-437P-201ENST00000459408 95 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 RPL23AP54-201ENST00000495129 419 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 AC097462.1-201ENST00000514125 324 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 AC090616.3-201ENST00000582184 217 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 AL590808.1-201ENST00000618696 141 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 U4.3-201ENST00000621047 82 ntBASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHA2Q9Y5H9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AL606845.1-201ENST00000404881 255 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AC060773.1-201ENST00000421698 310 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AL445687.1-201ENST00000439946 251 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 RNU7-172P-201ENST00000517125 64 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 U6.73-201ENST00000619194 103 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 AC012640.5-201ENST00000623897 319 ntBASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
PCDHA2Q9Y5H9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 RNU4-13P-201ENST00000364019 141 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 SNORA72-201ENST00000384339 132 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 MIR627-201ENST00000384979 97 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 RN7SKP284-201ENST00000411002 343 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 AC107027.2-201ENST00000512197 115 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 AP001485.1-201ENST00000604799 199 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHA2Q9Y5H9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 RNY3P5-201ENST00000384127 102 ntBASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 MIR1253-201ENST00000408273 105 ntBASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 AL121914.1-201ENST00000450188 156 ntBASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHA2Q9Y5H9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-136P-201ENST00000384663 107 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-376P-201ENST00000384731 106 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 MIR15B-201ENST00000385045 98 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RNA5SP496-201ENST00000391240 109 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 MIR887-201ENST00000401258 79 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RN7SKP101-201ENST00000411376 320 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 AC008413.1-201ENST00000511864 177 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms