Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHGA4Q9Y5G9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA4Q9Y5G9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA4Q9Y5G9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA4Q9Y5G9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 MIR372-201ENST00000362225 67 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-34-201ENST00000362441 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-12-201ENST00000362583 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-29-201ENST00000362834 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-9-201ENST00000362912 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-21-201ENST00000362963 81 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-14-201ENST00000363090 81 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-41-201ENST00000363608 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-11-201ENST00000363616 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-5-201ENST00000363633 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-39-201ENST00000363694 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-4-201ENST00000363810 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-6-201ENST00000363942 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-42-201ENST00000364273 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 Y_RNA.247-201ENST00000364500 92 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU6-1163P-201ENST00000364516 107 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-15-201ENST00000364809 81 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-26-201ENST00000365067 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-10-201ENST00000365073 81 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-43-201ENST00000365503 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORD115-36-201ENST00000365629 82 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 Y_RNA.470-201ENST00000384307 117 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SNORA8-201ENST00000384574 139 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 MIR519C-201ENST00000385053 87 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 PTMAP2-201ENST00000397627 327 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 AC090821.2-201ENST00000523552 176 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 AC093831.2-201ENST00000624393 3427 ntBASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PCDHGA4Q9Y5G9 AC096644.4-201ENST00000563417 2912 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 Y_RNA.140-201ENST00000363474 103 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNA5SP283-201ENST00000365604 119 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU6-1319P-201ENST00000390855 104 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU6-747P-201ENST00000390928 104 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU6-241P-201ENST00000391148 104 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 HSPE1P26-201ENST00000405341 275 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 MIR1911-201ENST00000410783 80 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU6-177P-201ENST00000411257 104 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 GOT2P5-201ENST00000433995 546 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AL161788.1-201ENST00000441805 169 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AL357552.1-201ENST00000445254 415 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 RNU1-45P-201ENST00000517191 141 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 MIR3152-201ENST00000579801 74 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AC140479.6-201ENST00000633535 357 ntBASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA4Q9Y5G9 AC005336.3-201ENST00000623833 2679 ntBASIC4.15□□□□□ -1.74
PCDHGA4Q9Y5G9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PCDHGA4Q9Y5G9 RNA5SP482-201ENST00000391269 118 ntBASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 AL117339.2-201ENST00000430475 180 ntBASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 RPPH1-2P-201ENST00000516688 293 ntBASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 AL138721.1-201ENST00000616756 179 ntBASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 AC002546.1-201ENST00000588041 2504 ntBASIC4.15□□□□□ -1.75
PCDHGA4Q9Y5G9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU6-315P-201ENST00000362666 107 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORD115-37-201ENST00000363768 82 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORD38.1-201ENST00000363863 68 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 RNA5SP175-201ENST00000364275 119 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU7-45P-201ENST00000459460 63 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 AL049873.1-201ENST00000480540 376 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 AC090255.1-201ENST00000495779 349 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 RNA5SP143-201ENST00000516936 115 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR4286-201ENST00000580651 93 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR4444-1-201ENST00000581696 74 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR4444-2-201ENST00000584390 74 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR8058-201ENST00000615737 89 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 ZNF962P-201ENST00000443465 3140 ntBASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGA4Q9Y5G9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms