Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 MIR342-201ENST00000362212 99 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 RNU6-1084P-201ENST00000362498 107 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 RNU6-546P-201ENST00000383991 107 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 SNORD38C-201ENST00000384381 69 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 RNY1P4-201ENST00000384595 115 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 AL627390.1-201ENST00000396055 340 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 Y_RNA.611-201ENST00000410682 108 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 RNA5SP143-201ENST00000516936 115 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 MIR4444-1-201ENST00000581696 74 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 MIR4444-2-201ENST00000584390 74 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 CR392039.5-201ENST00000623201 510 ntBASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB3Q9Y5E6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 Y_RNA.4-201ENST00000362333 112 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 U8.5-201ENST00000364528 136 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 snoU2-30.1-201ENST00000365012 70 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 RNU6-1201P-201ENST00000384227 107 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 AL035398.1-201ENST00000430869 322 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 AC009969.1-201ENST00000438726 172 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 RN7SL271P-201ENST00000487601 295 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 RPL23AP63-201ENST00000498752 471 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 RNU7-143P-201ENST00000516781 65 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 U6.98-201ENST00000637157 84 ntBASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHB3Q9Y5E6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 AC091152.2-201ENST00000591628 2569 ntBASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 RNU2-40P-201ENST00000410833 196 ntBASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 AC107083.1-201ENST00000439643 279 ntBASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 RNU6-991P-201ENST00000516168 107 ntBASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB3Q9Y5E6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 RNU1-105P-201ENST00000363470 161 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SNORD116-10-201ENST00000363791 102 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 Y_RNA.299-201ENST00000364973 94 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 MIR449B-201ENST00000384995 97 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SNORA57.3-201ENST00000411095 141 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 AL133547.1-201ENST00000448546 220 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SNORA31.4-201ENST00000516049 129 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 MIR6868-201ENST00000611215 58 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB3Q9Y5E6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 AC073346.2-201ENST00000624724 2058 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 MIR7-3-201ENST00000384898 110 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 MIR889-201ENST00000401280 79 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 RPL32P35-201ENST00000415214 394 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 GOT2P5-201ENST00000433995 546 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 AL031183.1-201ENST00000457667 207 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 SNORD45.4-201ENST00000516629 73 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 RNU1-142P-201ENST00000516682 145 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 MIR4474-201ENST00000579189 78 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 MIR548BB-201ENST00000626714 66 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 MIR338-201ENST00000636369 67 ntBASIC3.84□□□□□ -1.79
PCDHB3Q9Y5E6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB3Q9Y5E6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
PCDHB3Q9Y5E6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB3Q9Y5E6 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.8
PCDHB3Q9Y5E6 AC017071.1-201ENST00000564407 2204 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 Y_RNA.191-201ENST00000363972 113 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 Y_RNA.336-201ENST00000365307 109 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 RNU4-69P-201ENST00000410677 143 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AL109933.2-201ENST00000452651 260 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 snoU13.22-201ENST00000459428 104 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 RN7SL93P-201ENST00000463035 293 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AC006111.3-201ENST00000622137 383 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 AC021613.1-201ENST00000623880 111 ntBASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB3Q9Y5E6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms