Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 Y_RNA.84-201ENST00000363011 104 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.136-201ENST00000363444 102 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP37-201ENST00000365420 130 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RNU2-7P-201ENST00000410794 178 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RPL36AP21-201ENST00000490372 323 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC021269.2-201ENST00000532318 330 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 DEFB122-202ENST00000569013 197 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 MIR5694-201ENST00000581190 76 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-238P-201ENST00000363313 106 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.133-201ENST00000363428 110 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-290P-201ENST00000365212 101 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-326P-201ENST00000365480 107 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.541-201ENST00000384640 113 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-376P-201ENST00000384731 106 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-713P-201ENST00000384761 107 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR562-201ENST00000384894 95 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP511-201ENST00000410487 115 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP281-201ENST00000516504 135 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-63P-201ENST00000516690 95 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP437-201ENST00000517249 129 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 AC046143.2-201ENST00000609789 160 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR8062-201ENST00000621515 85 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 MIR6079-201ENST00000635807 62 ntBASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.149-201ENST00000363558 117 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.418-201ENST00000384029 102 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP109-201ENST00000391010 116 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-1203P-201ENST00000410703 110 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 AL591806.2-201ENST00000433122 173 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 AL162725.1-201ENST00000435405 301 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 HSPE1P9-201ENST00000440046 311 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 RNU2-31P-201ENST00000516954 155 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 MIR3145-201ENST00000580727 82 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 AC091178.2-201ENST00000584401 117 ntBASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LSM4Q9Y4Z0 AC131280.1-202ENST00000624067 4211 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.47-201ENST00000362697 108 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.376-201ENST00000365638 108 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-950P-201ENST00000384651 107 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-136P-201ENST00000384663 107 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 MIR520G-201ENST00000385064 90 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 SNORA53-201ENST00000391141 249 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-855P-201ENST00000410395 104 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 MTND4LP30-201ENST00000454092 297 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AC090255.1-201ENST00000495779 349 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-191P-201ENST00000516295 94 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 RNU6-341P-201ENST00000516973 96 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AC015720.1-201ENST00000565251 277 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 AC009831.4-201ENST00000620744 325 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 U6.104-201ENST00000637979 90 ntBASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LSM4Q9Y4Z0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 RNU4-80P-201ENST00000363200 141 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 Y_RNA.512-201ENST00000384518 102 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 MIR764-201ENST00000390811 85 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 RPS20P10-201ENST00000451209 253 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AC091021.1-201ENST00000468051 388 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 MTCO2P24-201ENST00000515611 426 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AC136628.3-201ENST00000521868 290 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AL358944.1-201ENST00000528537 144 ntBASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM4Q9Y4Z0 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms