Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC024067.1-201ENST00000426199 223 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 HSPE1P25-201ENST00000455484 251 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 RPL23AP63-201ENST00000498752 471 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 AC010598.1-201ENST00000510378 103 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 SNORA70.12-201ENST00000516084 153 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 AC006435.5-201ENST00000624486 112 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 AP000553.5-201ENST00000641933 54 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 MIR340-201ENST00000362125 95 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.4-201ENST00000362333 112 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 RNU6-271P-201ENST00000363858 105 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.193-201ENST00000363979 102 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.569-201ENST00000384749 103 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 RNA5SP212-201ENST00000391223 107 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 RNU6-1203P-201ENST00000410703 110 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 RNU6-1199P-201ENST00000411249 104 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 AC108667.1-201ENST00000428618 249 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 RNA5SP57-201ENST00000459463 123 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 AC127459.3-201ENST00000624328 466 ntBASIC2.98□□□□□ -1.93
CDK11AQ9UQ88 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 SNORD114-7-201ENST00000362520 77 ntBASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 SNORD115-30-201ENST00000364117 82 ntBASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.383-201ENST00000383855 97 ntBASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK11AQ9UQ88 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.286-201ENST00000364813 102 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 RNA5SP37-201ENST00000365420 130 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.396-201ENST00000383949 103 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 RNU6-102P-201ENST00000384485 104 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 RNU6-1248P-201ENST00000391096 64 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 SNORD65B-201ENST00000459126 73 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC107393.1-201ENST00000512403 346 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC108729.3-201ENST00000513484 108 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 SUMO2P18-201ENST00000518873 252 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 AC005828.6-201ENST00000606610 232 ntBASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDK11AQ9UQ88 SNORD114-6-201ENST00000364393 72 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU6-326P-201ENST00000365480 107 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU6-472P-201ENST00000384299 107 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.541-201ENST00000384640 113 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 MT-TW-201ENST00000387382 68 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 SNORA17.3-201ENST00000391159 129 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 AL031003.1-201ENST00000404229 172 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU6-710P-201ENST00000410424 105 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU2-40P-201ENST00000410833 196 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 AC010154.1-201ENST00000425857 269 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU6-1338P-201ENST00000516328 91 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 RNU2-31P-201ENST00000516954 155 ntBASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDK11AQ9UQ88 AL391987.6-201ENST00000305671 199 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 MIR335-201ENST00000362173 94 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 RNA5SP493-201ENST00000364115 91 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.401-201ENST00000383965 117 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 RNU6-514P-201ENST00000384208 107 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 SNORA20B-201ENST00000384220 132 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 RNU6-574P-201ENST00000384265 107 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.483-201ENST00000384380 101 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 AC060773.1-201ENST00000421698 310 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 ATP5J2P3-201ENST00000451550 258 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 AC079804.2-201ENST00000490376 200 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 AC011406.1-201ENST00000512440 370 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 RNU6-436P-201ENST00000516171 114 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 AC010615.1-201ENST00000594254 1764 ntBASIC2.94□□□□□ -1.94
CDK11AQ9UQ88 RNA5SP190-201ENST00000365222 118 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 MIR873-201ENST00000401120 77 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 RNA5SP501-201ENST00000410990 112 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 RNA5SP247-201ENST00000411181 105 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 AL137100.2-201ENST00000555786 315 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 SNRPGP19-201ENST00000603826 189 ntBASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDK11AQ9UQ88 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 SNORA25.1-201ENST00000362326 128 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.136-201ENST00000363444 102 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.329-201ENST00000365209 107 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 MIR9-3-201ENST00000385084 90 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AC016909.1-201ENST00000415916 166 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 HMGN2P38-201ENST00000423806 265 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AC003989.2-201ENST00000440224 169 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 AC025033.1-201ENST00000463883 194 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 RNU6-1053P-201ENST00000515930 101 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 Y_RNA.668-201ENST00000516233 93 ntBASIC2.92□□□□□ -1.94
CDK11AQ9UQ88 RNU6-966P-201ENST00000516479 104 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms