Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR562-201ENST00000384894 95 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 MIR624-201ENST00000385217 97 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 RNA5SP184-201ENST00000411071 108 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 AL139132.1-201ENST00000431587 344 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 MTCO1P44-201ENST00000441935 243 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-1096P-201ENST00000517089 102 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 MIR3129-201ENST00000581095 76 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 U6.73-201ENST00000619194 103 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 MIR1248-201ENST00000629190 106 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 MTND5P18-201ENST00000445624 1801 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 RNU1-72P-201ENST00000362976 153 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 AC006989.1-201ENST00000427212 131 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 AC007751.1-201ENST00000529260 376 ntBASIC3.95□□□□□ -1.78
ZC3H4Q9UPT8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-1138P-201ENST00000365359 106 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 U6atac.2-201ENST00000408644 118 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 AC063976.3-201ENST00000426849 329 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 HMGN2P34-201ENST00000437647 269 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 RPS12P18-201ENST00000442381 270 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 CKS1BP2-201ENST00000497342 240 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 RN7SKP282-201ENST00000516824 299 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 AC090115.4-201ENST00000609970 188 ntBASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
ZC3H4Q9UPT8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AC062016.1-201ENST00000355719 319 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-546P-201ENST00000383991 107 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 MIR891A-201ENST00000401237 79 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 RNU2-32P-201ENST00000411193 191 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AF228730.3-201ENST00000436691 102 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AC105272.1-201ENST00000438604 198 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 SNORA4.4-201ENST00000515921 135 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AC018630.3-201ENST00000542637 96 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 AL365205.2-201ENST00000594586 68 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.93□□□□□ -1.78
ZC3H4Q9UPT8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-1186P-201ENST00000410429 97 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AL161788.1-201ENST00000441805 169 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AL021397.1-201ENST00000451806 248 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AC233266.1-201ENST00000454518 96 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 RNA5SP367-201ENST00000516557 118 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 Y_RNA.694-201ENST00000516677 117 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-1270P-201ENST00000517128 108 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 MIR4319-201ENST00000577285 85 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 MIR5582-201ENST00000579697 68 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 MIR3199-1-201ENST00000582434 88 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AC073413.2-201ENST00000604332 360 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AC242852.1-201ENST00000612151 96 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 AC244015.1-201ENST00000622301 99 ntBASIC3.92□□□□□ -1.78
ZC3H4Q9UPT8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 Y_RNA.66-201ENST00000362862 102 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 SNORA71.1-201ENST00000364523 117 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 RNY4P30-201ENST00000410216 95 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 AC010401.1-201ENST00000463867 348 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 RPS29P24-201ENST00000486345 171 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 Y_RNA.677-201ENST00000516401 85 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 RNU6-504P-201ENST00000516568 104 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 AC091544.4-201ENST00000555268 342 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 MIR2682-201ENST00000580305 110 ntBASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.91□□□□□ -1.78
ZC3H4Q9UPT8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZC3H4Q9UPT8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZC3H4Q9UPT8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZC3H4Q9UPT8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 SNORA1-201ENST00000384107 130 ntBASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 MIRLET7F2-201ENST00000385277 83 ntBASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 Z96811.1-201ENST00000445880 108 ntBASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 PRELID2P1-201ENST00000552837 301 ntBASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 AC022217.4-201ENST00000604389 163 ntBASIC3.9□□□□□ -1.79
ZC3H4Q9UPT8 AC131280.1-202ENST00000624067 4211 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms