Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC012308.1-201ENST00000451232 178 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 RNU7-123P-201ENST00000515911 60 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-581P-201ENST00000516214 105 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-1270P-201ENST00000517128 108 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 AC010889.1-201ENST00000566193 2666 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-509P-201ENST00000363519 107 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-987P-201ENST00000384759 104 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 AL031121.1-201ENST00000406553 254 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 COTL1P1-201ENST00000422309 375 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 RPL37P4-201ENST00000448908 268 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 AC080013.2-201ENST00000460866 323 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 MIR4276-201ENST00000584832 70 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 AL162274.2-201ENST00000614406 332 ntBASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
PDZRN3Q9UPQ7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNU4-15P-201ENST00000362613 141 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 Y_RNA.96-201ENST00000363092 109 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNU4-13P-201ENST00000364019 141 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-1305P-201ENST00000364353 104 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 Y_RNA.360-201ENST00000365512 102 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNA5SP354-201ENST00000391247 136 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 AL139095.1-201ENST00000404326 391 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 HMGN2P30-201ENST00000423237 256 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNU7-164P-201ENST00000459221 62 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 AC004223.1-201ENST00000479840 271 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNA5SP20-201ENST00000515976 84 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 RNU1-61P-201ENST00000516107 151 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 SNORA70.16-201ENST00000516390 95 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 AF117829.1-206ENST00000621883 3802 ntBASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDZRN3Q9UPQ7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-117P-201ENST00000365415 107 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 SNORD24-201ENST00000383884 75 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 MIR586-201ENST00000385035 97 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 MIR325-201ENST00000385260 98 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 U8.17-201ENST00000391292 132 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-887P-201ENST00000410660 100 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 AC009238.1-201ENST00000442165 424 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 RPS12P18-201ENST00000442381 270 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 AC009237.6-201ENST00000446969 424 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 SNORD65B-201ENST00000459126 73 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 RN7SL330P-201ENST00000469709 307 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 RNU7-6P-201ENST00000516845 62 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 Y_RNA.705-201ENST00000516862 110 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDZRN3Q9UPQ7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 MIR181A2-201ENST00000384863 110 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 MIR548A2-201ENST00000384956 97 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 AC063976.3-201ENST00000426849 329 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 ARF4P2-201ENST00000430209 526 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 AC010598.1-201ENST00000510378 103 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 RNA5SP341-201ENST00000516261 117 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 MIR4474-201ENST00000579189 78 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 MIR5197-201ENST00000583721 112 ntBASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDZRN3Q9UPQ7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-217P-201ENST00000384164 104 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.507-201ENST00000384500 99 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 RNU4-37P-201ENST00000410214 84 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 AC009414.1-201ENST00000427200 443 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 RN7SL442P-201ENST00000473804 320 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-523P-201ENST00000516304 54 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 AC073413.2-201ENST00000604332 360 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 HSPE1P7-201ENST00000604681 321 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 U6.73-201ENST00000619194 103 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 AC004944.1-201ENST00000517807 3059 ntBASIC4.26□□□□□ -1.73
PDZRN3Q9UPQ7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-633P-201ENST00000362612 103 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 SNORA80A-201ENST00000363922 136 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 SNORA18-201ENST00000384416 132 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 MRPS17P9-201ENST00000511924 393 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 MIR3618-201ENST00000580330 88 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 AC087741.2-201ENST00000619415 172 ntBASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PDZRN3Q9UPQ7 PWAR6-201ENST00000552334 4618 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.95-201ENST00000363079 95 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-750P-201ENST00000390946 107 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-733P-201ENST00000410759 104 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 AC107934.2-201ENST00000518653 310 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 AC027419.1-201ENST00000522976 328 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms