Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 MIR340-201ENST00000362125 95 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 RNU6-978P-201ENST00000364371 103 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 CYCSP49-201ENST00000420810 319 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 AC087499.2-201ENST00000432861 149 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 AC245047.4-201ENST00000433189 144 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 SNORA4.4-201ENST00000515921 135 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 RNU6-991P-201ENST00000516168 107 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 RPL23AP91-201ENST00000569211 455 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 AL033523.1-201ENST00000605153 153 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 U6.73-201ENST00000619194 103 ntBASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
PCDHA4Q9UN74 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 RNU6-1080P-201ENST00000383982 107 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 AL138827.1-201ENST00000402666 306 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 SNORD11-201ENST00000459124 84 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 SNORD77.4-201ENST00000516158 81 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 RNU6-659P-201ENST00000516454 104 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.686-201ENST00000516548 134 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 AC090142.3-201ENST00000519012 385 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 AC011604.1-201ENST00000545978 196 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 uc_338.4-201ENST00000616635 176 ntBASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.796-201ENST00000364268 102 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 RNU6-915P-201ENST00000364943 103 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.799-201ENST00000364992 102 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 MIR1253-201ENST00000408273 105 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 AC105272.1-201ENST00000438604 198 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 RNA5SP153-201ENST00000516498 76 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA4Q9UN74 AC103988.1-201ENST00000566382 2177 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 RNU2-63P-201ENST00000410792 194 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 AC060773.1-201ENST00000421698 310 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 COTL1P1-201ENST00000422309 375 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 RPS29P21-201ENST00000496272 170 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 AC006386.2-201ENST00000624491 75 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 AC012005.1-201ENST00000624575 75 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
PCDHA4Q9UN74 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 RNU6-1209P-201ENST00000363655 107 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 RNU1-96P-201ENST00000364163 162 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 SNORA25.7-201ENST00000364375 127 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 RNU6-1336P-201ENST00000383886 109 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.584-201ENST00000391090 114 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 AC023449.1-201ENST00000454464 154 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 RN7SKP132-201ENST00000516001 208 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 AC097639.2-201ENST00000603159 172 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 AL355297.2-201ENST00000604792 129 ntBASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDHA4Q9UN74 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.634-201ENST00000364811 113 ntBASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 MIR562-201ENST00000384894 95 ntBASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 ELOCP29-201ENST00000588193 334 ntBASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 MAPK10-362ENST00000641864 4484 ntBASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDHA4Q9UN74 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 RNU6-834P-201ENST00000362367 110 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.91-201ENST00000363042 107 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.111-201ENST00000363248 100 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 Y_RNA.563-201ENST00000384707 108 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 MIR561-201ENST00000385216 97 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 RNU6-220P-201ENST00000390919 107 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 RNU2-70P-201ENST00000410718 179 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 HMGN2P34-201ENST00000437647 269 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 EEF1B2P7-201ENST00000451177 676 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 RNU6-1146P-201ENST00000516282 102 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 RNU6-1096P-201ENST00000517089 102 ntBASIC3.11□□□□□ -1.91
PCDHA4Q9UN74 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms