Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NOTCH3Q9UM47 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 RNU6-1205P-201ENST00000363625 106 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 RNY1P11-201ENST00000363759 113 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 RNU6-140P-201ENST00000384566 108 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 MIR570-201ENST00000384917 97 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 AC012306.1-201ENST00000423267 114 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 RNU6-781P-201ENST00000516377 101 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 POLR3GP1-201ENST00000594073 261 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 MAPK10-322ENST00000641485 4530 ntBASIC1.84□□□□□ -2.11
NOTCH3Q9UM47 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 SNORD114-7-201ENST00000362520 77 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 RNY1P10-201ENST00000363268 113 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 SNORD58C-201ENST00000365223 64 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP210-201ENST00000391034 120 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 SNORA17.3-201ENST00000391159 129 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 MIR320B2-201ENST00000408479 138 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 AC004866.1-201ENST00000411748 78 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 snoU13.6-201ENST00000458785 104 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP281-201ENST00000516504 135 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 AP004371.1-201ENST00000525240 214 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 LINC00933-203ENST00000559812 219 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 Pinc.1-201ENST00000616452 154 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 MIR6873-201ENST00000622788 63 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 AC068205.3-201ENST00000636385 468 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 AL136164.4-201ENST00000625013 2135 ntBASIC1.84□□□□□ -2.12
NOTCH3Q9UM47 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-508P-201ENST00000363231 103 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-799P-201ENST00000363567 107 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-1280P-201ENST00000365211 107 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-622P-201ENST00000384272 103 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 AL603914.1-201ENST00000401964 204 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-855P-201ENST00000410395 104 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-437P-201ENST00000459408 95 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 AC010285.1-201ENST00000470580 392 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 AIG1P1-201ENST00000503376 148 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-344P-201ENST00000516635 111 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-762P-201ENST00000517107 102 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 SNORD87-201ENST00000364849 89 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-136P-201ENST00000384663 107 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 U6atac.2-201ENST00000408644 118 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNU6-383P-201ENST00000410864 94 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RPS3AP1-201ENST00000413190 320 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 Z98742.2-201ENST00000431564 187 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 AC245047.4-201ENST00000433189 144 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 MIR3136-201ENST00000583498 78 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP108-201ENST00000605921 117 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 MIR6134-201ENST00000617606 109 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 SNORD98-201ENST00000636377 67 ntBASIC1.83□□□□□ -2.12
NOTCH3Q9UM47 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AL035425.3-201ENST00000564206 4996 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 MIR493-201ENST00000385254 89 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNU6-440P-201ENST00000390882 105 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RPL39P40-201ENST00000445481 146 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORA31.1-201ENST00000515993 133 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORA31.5-201ENST00000516190 133 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORD19.2-201ENST00000516978 73 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AP003357.1-201ENST00000604497 148 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC067747.1-201ENST00000608026 250 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC002543.1-201ENST00000299783 1954 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 Z82209.1-201ENST00000422141 2135 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORA72-201ENST00000384339 132 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORA80E-201ENST00000384744 137 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNU6-1228P-201ENST00000391014 107 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNU6-159P-201ENST00000391080 106 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AL359511.1-201ENST00000402970 211 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP390-201ENST00000410191 113 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC007064.1-201ENST00000412238 351 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC004386.2-201ENST00000441858 148 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RPL23AP7-203ENST00000449021 469 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms