Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNA5SP190-201ENST00000365222 118 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AC060773.1-201ENST00000421698 310 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AC096920.1-201ENST00000423991 241 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 TRBVB-201ENST00000477100 408 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 MIR3149-201ENST00000584629 83 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AL096840.1-201ENST00000603287 93 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 AP001282.2-201ENST00000616149 309 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 U4.1-201ENST00000620349 87 ntBASIC2.4□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 RNU6-290P-201ENST00000365212 101 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AL355796.1-201ENST00000406706 323 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 MIR1302-6-201ENST00000408466 90 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 MIR1283-2-201ENST00000408621 87 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AC008134.1-201ENST00000420943 193 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 RNU6-436P-201ENST00000516171 114 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 MIR3169-201ENST00000578032 83 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 MIR3684-201ENST00000579779 74 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AC008749.1-201ENST00000597650 306 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AC006380.1-201ENST00000603598 186 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 AC006001.4-201ENST00000622243 395 ntBASIC2.39□□□□□ -2.03
HDAC9Q9UKV0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 SNORD65B-201ENST00000459126 73 ntBASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 SNORD13-201ENST00000459299 104 ntBASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 SNORA25.15-201ENST00000516487 89 ntBASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 AC245060.5-201ENST00000610778 3293 ntBASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
HDAC9Q9UKV0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 SNORA20B-201ENST00000384220 132 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 AL031003.1-201ENST00000404229 172 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 BX510359.4-201ENST00000423750 193 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 MRPS17P9-201ENST00000511924 393 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 AP005660.1-201ENST00000522972 293 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 AC022513.1-201ENST00000624512 117 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 AL159152.1-201ENST00000635019 2587 ntBASIC2.37□□□□□ -2.03
HDAC9Q9UKV0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 RNU1-58P-201ENST00000362413 163 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 RNU6-702P-201ENST00000364982 107 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 RNU11-3P-201ENST00000391111 133 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AP1B1P2-201ENST00000416196 106 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 MRPS10P1-201ENST00000448483 130 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 SUMO1P2-201ENST00000452524 304 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC010598.1-201ENST00000510378 103 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC011406.1-201ENST00000512440 370 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC023157.2-201ENST00000540596 141 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AC004817.2-201ENST00000561794 651 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
HDAC9Q9UKV0 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 RNU6-505P-201ENST00000384427 107 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 RNU4-62P-201ENST00000410125 130 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 HMGN2P34-201ENST00000437647 269 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 POLR2KP2-201ENST00000438155 177 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 SNORD127-201ENST00000458892 86 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 SUMO2P18-201ENST00000518873 252 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 MIR4299-201ENST00000577899 72 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 DEFB117-201ENST00000602356 141 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 AL773524.1-201ENST00000614065 229 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 U6.104-201ENST00000637979 90 ntBASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HDAC9Q9UKV0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 MIR335-201ENST00000362173 94 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 RNU6-661P-201ENST00000362409 107 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 SNORD114-7-201ENST00000362520 77 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 SNORA27.1-201ENST00000362604 124 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 RNU6-23P-201ENST00000363283 107 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 RNU2-61P-201ENST00000411069 191 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 AC244636.1-201ENST00000421152 228 ntBASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.34□□□□□ -2.03
HDAC9Q9UKV0 DEFB108E-201ENST00000524692 240 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms