Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC090617.10-201ENST00000624308 134 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 SNORA27.1-201ENST00000362604 124 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.85-201ENST00000363014 111 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.301-201ENST00000364990 103 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 RNU6-831P-201ENST00000384548 107 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.517-201ENST00000384551 106 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 MIR508-201ENST00000384857 115 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 MIR329-1-201ENST00000385028 80 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 AL451046.2-201ENST00000403074 277 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 AL355796.1-201ENST00000406706 323 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 RNU5A-5P-201ENST00000411054 116 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 ELOCP21-201ENST00000412558 336 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 USP9YP16-201ENST00000430287 407 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 STAG3L5P-204ENST00000443759 179 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 USP9YP23-201ENST00000455085 407 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 U4.5-201ENST00000617137 123 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
CTNNA3Q9UI47 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNA5SP347-201ENST00000362445 119 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNU6-593P-201ENST00000364716 112 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNU6-842P-201ENST00000384269 107 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 UBE2V1P7-201ENST00000446395 340 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNU6-917P-201ENST00000516294 104 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNU6-1088P-201ENST00000516850 104 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 RNU1-54P-201ENST00000517181 120 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 AC105029.1-201ENST00000520250 669 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 AC023157.2-201ENST00000540596 141 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 AC103591.3-201ENST00000608684 209 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CTNNA3Q9UI47 AL589743.1-201ENST00000551932 2712 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 MIRLET7C-201ENST00000362160 84 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.89-201ENST00000363031 102 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.178-201ENST00000363832 102 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 RNU6-1090P-201ENST00000364065 94 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.364-201ENST00000365532 101 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.450-201ENST00000384198 113 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 MIR190B-201ENST00000401119 79 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 HMGN1P33-201ENST00000432945 451 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 RNA5SP20-201ENST00000515976 84 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.681-201ENST00000516445 113 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AC093023.1-201ENST00000547375 507 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 MIR4778-201ENST00000577635 80 ntBASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.8□□□□□ -2.28
CTNNA3Q9UI47 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AC068700.1-201ENST00000565862 3754 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.68-201ENST00000362881 102 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNU6-623P-201ENST00000363143 105 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.106-201ENST00000363189 100 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.265-201ENST00000364677 108 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNU6-117P-201ENST00000365415 107 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.361-201ENST00000365515 120 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNU6-306P-201ENST00000384617 107 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 MIR520G-201ENST00000385064 90 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 U8.16-201ENST00000391279 133 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNU6-1148P-201ENST00000410992 104 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AL139396.1-201ENST00000421137 167 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 USP9YP30-201ENST00000430729 455 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 CALM2P4-201ENST00000430810 426 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AL137792.2-201ENST00000443484 235 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 SNORA70.12-201ENST00000516084 153 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNU6-1278P-201ENST00000516130 107 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 RNA5SP330-201ENST00000517096 96 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 DEFB108E-201ENST00000524692 240 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AC125232.2-201ENST00000592457 143 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 PRELID3BP2-201ENST00000605362 201 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 MIR3662-201ENST00000637030 95 ntBASIC0.79□□□□□ -2.28
CTNNA3Q9UI47 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 RNU6-833P-201ENST00000363486 107 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 MIR873-201ENST00000401120 77 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 DLGAP5P1-201ENST00000430307 464 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 PCNPP5-201ENST00000452246 481 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 AC104260.1-201ENST00000616660 539 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 AC027279.3-201ENST00000625055 122 ntBASIC0.78□□□□□ -2.28
CTNNA3Q9UI47 SNORA1B-201ENST00000362535 133 ntBASIC0.77□□□□□ -2.29
CTNNA3Q9UI47 Y_RNA.363-201ENST00000365529 113 ntBASIC0.77□□□□□ -2.29
CTNNA3Q9UI47 RNU6-1001P-201ENST00000411265 100 ntBASIC0.77□□□□□ -2.29
CTNNA3Q9UI47 AC018865.2-201ENST00000423631 129 ntBASIC0.77□□□□□ -2.29
CTNNA3Q9UI47 MTCYBP10-201ENST00000424905 650 ntBASIC0.77□□□□□ -2.29
CTNNA3Q9UI47 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms