Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 MIR4648-201ENST00000580107 72 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AL365265.1-201ENST00000621045 234 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.44□□□□□ -2.02
DKK3Q9UBP4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU6-653P-201ENST00000363074 106 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU1-23P-201ENST00000363361 144 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU6-438P-201ENST00000365561 103 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU6-763P-201ENST00000390865 106 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU6-918P-201ENST00000391219 106 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 PCNPP3-201ENST00000393579 471 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 MIR873-201ENST00000401120 77 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AL135790.2-201ENST00000437701 267 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC104332.1-201ENST00000440471 797 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RN7SL636P-201ENST00000497504 294 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.44□□□□□ -2.02
DKK3Q9UBP4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC093259.1-201ENST00000509755 300 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC010598.1-201ENST00000510378 103 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC107393.1-201ENST00000512403 346 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AC006435.5-201ENST00000624486 112 ntBASIC2.44□□□□□ -2.02
DKK3Q9UBP4 AL359851.1-201ENST00000569460 4997 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 RNU6-271P-201ENST00000363858 105 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 MIR764-201ENST00000390811 85 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AL355796.1-201ENST00000406706 323 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 BTF3P11-201ENST00000426582 477 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 RPL23AP7-203ENST00000449021 469 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 HSPE1P13-201ENST00000451143 297 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 SNORD65B-201ENST00000459126 73 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AC234781.5-201ENST00000508429 271 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 RNA5SP490-201ENST00000517141 136 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AC025647.1-201ENST00000517879 253 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 AL355297.2-201ENST00000604792 129 ntBASIC2.43□□□□□ -2.02
DKK3Q9UBP4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
DKK3Q9UBP4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
DKK3Q9UBP4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DKK3Q9UBP4 SNORA27.1-201ENST00000362604 124 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.150-201ENST00000363562 102 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 RNU6-682P-201ENST00000363843 106 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 RNU6-47P-201ENST00000383866 107 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 SNORA72.4-201ENST00000384174 132 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 SNORA20B-201ENST00000384220 132 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC123900.1-201ENST00000420390 96 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC008134.1-201ENST00000420943 193 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 MTCO1P44-201ENST00000441935 243 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC016717.1-201ENST00000448918 286 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.42□□□□□ -2.02
DKK3Q9UBP4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.42□□□□□ -2.02
DKK3Q9UBP4 CYCSP26-201ENST00000534107 320 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AC013791.1-201ENST00000616619 62 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
DKK3Q9UBP4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
DKK3Q9UBP4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DKK3Q9UBP4 RNA5SP99-201ENST00000364020 114 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 RNU6-418P-201ENST00000384035 107 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 SNORD14D-201ENST00000384390 87 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 SNORA26.5-201ENST00000391215 123 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 RNU6-855P-201ENST00000410395 104 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 RNU6-57P-201ENST00000411348 103 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 COX6CP10-201ENST00000416832 224 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AL357134.1-201ENST00000445848 426 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 U8.19-201ENST00000459095 133 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AC026436.1-201ENST00000510537 270 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.41□□□□□ -2.02
DKK3Q9UBP4 AL365434.2-201ENST00000607979 234 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 U6.106-201ENST00000636360 105 ntBASIC2.41□□□□□ -2.02
DKK3Q9UBP4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.4□□□□□ -2.02
DKK3Q9UBP4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.4□□□□□ -2.02
DKK3Q9UBP4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.02
DKK3Q9UBP4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DKK3Q9UBP4 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 RNU6-899P-201ENST00000363947 107 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 RNU2-40P-201ENST00000410833 196 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 AC010531.2-201ENST00000465012 153 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms