Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RN7SKP282-201ENST00000516824 299 ntBASIC3.35□□□□□ -1.87
CNTN3Q9P232 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CNTN3Q9P232 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN3Q9P232 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN3Q9P232 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CNTN3Q9P232 Y_RNA.114-201ENST00000363265 113 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 Y_RNA.525-201ENST00000384570 113 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RNU6-429P-201ENST00000384582 108 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 MIR561-201ENST00000385216 97 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 MIR23A-201ENST00000385245 73 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RNY4P18-201ENST00000391107 89 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RPS15AP28-201ENST00000435088 386 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RNU6-772P-201ENST00000516042 105 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RNU6-1096P-201ENST00000517089 102 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 RNU6-365P-201ENST00000517113 106 ntBASIC3.34□□□□□ -1.87
CNTN3Q9P232 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN3Q9P232 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN3Q9P232 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN3Q9P232 RNU6-647P-201ENST00000364243 107 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 MIR624-201ENST00000385217 97 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 MLLT10P1-201ENST00000418346 262 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN3Q9P232 AL445687.1-201ENST00000439946 251 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN3Q9P232 RNU7-99P-201ENST00000516271 62 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 SNORA18.4-201ENST00000516440 124 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 Y_RNA.709-201ENST00000516952 92 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 AC133485.4-201ENST00000561835 220 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 AC138907.4-201ENST00000570107 226 ntBASIC3.33□□□□□ -1.88
CNTN3Q9P232 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN3Q9P232 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN3Q9P232 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN3Q9P232 AC073325.2-201ENST00000339545 159 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 RNU1-23P-201ENST00000363361 144 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 Y_RNA.242-201ENST00000364473 110 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 RNA5SP127-201ENST00000411051 133 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN3Q9P232 AC060773.1-201ENST00000421698 310 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 HMGN2P34-201ENST00000437647 269 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTN3Q9P232 RNU6-991P-201ENST00000516168 107 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 RNU6-504P-201ENST00000516568 104 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 Y_RNA.690-201ENST00000516603 95 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN3Q9P232 AC007229.1-201ENST00000590455 412 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 AL365205.2-201ENST00000594586 68 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 MIR6129-201ENST00000616087 109 ntBASIC3.32□□□□□ -1.88
CNTN3Q9P232 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN3Q9P232 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNTN3Q9P232 MIR22-201ENST00000362190 85 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 SNORA71.1-201ENST00000364523 117 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 Y_RNA.486-201ENST00000384398 107 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 RNU2-48P-201ENST00000410694 191 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
CNTN3Q9P232 AC092427.1-202ENST00000430569 476 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 MTATP6P21-201ENST00000440681 189 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 MTND5P34-201ENST00000568888 325 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
CNTN3Q9P232 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNTN3Q9P232 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNTN3Q9P232 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNTN3Q9P232 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
CNTN3Q9P232 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNTN3Q9P232 MIR340-201ENST00000362125 95 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 SNORA44-201ENST00000384584 132 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 HMGN1P7-201ENST00000491722 313 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 AC011406.1-201ENST00000512440 370 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
CNTN3Q9P232 AC073413.2-201ENST00000604332 360 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CNTN3Q9P232 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.3□□□□□ -1.88
CNTN3Q9P232 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.3□□□□□ -1.88
CNTN3Q9P232 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNTN3Q9P232 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNTN3Q9P232 AL035425.3-201ENST00000564206 4996 ntBASIC3.3□□□□□ -1.88
CNTN3Q9P232 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.29□□□□□ -1.88
CNTN3Q9P232 AC018630.2-201ENST00000534866 2403 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
CNTN3Q9P232 snoU2-30.2-201ENST00000362805 70 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 SNORA40.5-201ENST00000391061 128 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 AL031121.1-201ENST00000406553 254 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 RNU6-1186P-201ENST00000410429 97 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.29□□□□□ -1.88
CNTN3Q9P232 AC018634.1-201ENST00000437554 401 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 AL353689.1-201ENST00000438895 199 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.29□□□□□ -1.88
CNTN3Q9P232 CYCTP-201ENST00000504253 315 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 RNU5E-3P-201ENST00000515913 68 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 RNU6-589P-201ENST00000516485 107 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 RNU6-1061P-201ENST00000516530 99 ntBASIC3.29□□□□□ -1.88
CNTN3Q9P232 AL358944.1-201ENST00000528537 144 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms