Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MIR3674-201ENST00000636576 68 ntBASIC1.14□□□□□ -2.23
HMG20BQ9P0W2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
HMG20BQ9P0W2 RNU6-424P-201ENST00000384367 105 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC233266.1-201ENST00000454518 96 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 RNU6-322P-201ENST00000516010 103 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 SNORD116-28-201ENST00000516123 91 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 SCARNA16.2-201ENST00000516520 172 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AP002004.2-201ENST00000531656 154 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC242852.1-201ENST00000612151 96 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 MIR6734-201ENST00000621166 68 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC244015.1-201ENST00000622301 99 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC127459.3-201ENST00000624328 466 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 AC005592.1-201ENST00000566527 1640 ntBASIC1.13□□□□□ -2.23
HMG20BQ9P0W2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 Y_RNA.72-201ENST00000362894 103 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 Y_RNA.88-201ENST00000363029 99 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 Y_RNA.339-201ENST00000365325 102 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 Y_RNA.404-201ENST00000383978 102 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RNU6-136P-201ENST00000384663 107 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AL451046.2-201ENST00000403074 277 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RAB28P5-201ENST00000427490 651 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AL137792.2-201ENST00000443484 235 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RPL17P19-201ENST00000489069 552 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 OR9P1P-201ENST00000496431 281 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 SNORA40.9-201ENST00000515895 93 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RNU6-358P-201ENST00000516564 75 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC091178.2-201ENST00000584401 117 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC060780.3-201ENST00000589464 80 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC084782.3-201ENST00000612282 578 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 MIR1244-1-201ENST00000612829 85 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 MIR1244-3-201ENST00000635744 85 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 MIR1244-2-201ENST00000636449 85 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 MIR1244-4-202ENST00000636813 85 ntBASIC1.12□□□□□ -2.23
HMG20BQ9P0W2 RNA5SP482-201ENST00000391269 118 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 SNORA75.4-201ENST00000391278 119 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 AC114482.1-201ENST00000418010 247 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 MIR2053-201ENST00000459295 91 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 SNORA31.4-201ENST00000516049 129 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 RNU7-30P-201ENST00000516835 62 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 AC090049.2-201ENST00000550377 109 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 AC068790.6-201ENST00000602558 258 ntBASIC1.11□□□□□ -2.23
HMG20BQ9P0W2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 RNU6-318P-201ENST00000384283 103 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 RNY1P14-201ENST00000384426 108 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 MIR653-201ENST00000385279 96 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 MIR873-201ENST00000401120 77 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 AL049830.1-201ENST00000468034 425 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
HMG20BQ9P0W2 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 MIR410-201ENST00000362222 80 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 RNU6-454P-201ENST00000364292 107 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 RNU6-99P-201ENST00000364721 107 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 SNORA2.2-201ENST00000365473 135 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 SNORD12B-201ENST00000410433 91 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 RPS4XP11-201ENST00000446897 772 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 AP002001.1-203ENST00000534002 267 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HMG20BQ9P0W2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.09□□□□□ -2.24
HMG20BQ9P0W2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 RNU6-767P-201ENST00000384132 107 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 MIR520G-201ENST00000385064 90 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 SNORD41-201ENST00000386967 70 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 MTND1P4-201ENST00000435196 415 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 RPL39P39-201ENST00000455840 151 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AC116353.2-201ENST00000505332 712 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AC022493.2-201ENST00000506122 481 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.08□□□□□ -2.24
HMG20BQ9P0W2 AC080078.2-201ENST00000603766 501 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms