Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
VSX1Q9NZR4 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
VSX1Q9NZR4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VSX1Q9NZR4 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
VSX1Q9NZR4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.36□□□□□ -2.03
VSX1Q9NZR4 AL365434.2-201ENST00000607979 234 ntBASIC2.36□□□□□ -2.03
VSX1Q9NZR4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
VSX1Q9NZR4 RNU6-746P-201ENST00000384112 109 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 AC117454.1-201ENST00000491120 168 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.35□□□□□ -2.03
VSX1Q9NZR4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 AC027419.1-201ENST00000522976 328 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 AC024995.1-201ENST00000523014 93 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 MIR4744-201ENST00000581563 82 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 AL359075.3-201ENST00000613288 217 ntBASIC2.35□□□□□ -2.03
VSX1Q9NZR4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AL392103.1-201ENST00000447000 198 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RNU7-94P-201ENST00000459576 63 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC015720.1-201ENST00000565251 277 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC006386.2-201ENST00000624491 75 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC012005.1-201ENST00000624575 75 ntBASIC2.34□□□□□ -2.03
VSX1Q9NZR4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.34□□□□□ -2.03
VSX1Q9NZR4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
VSX1Q9NZR4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNU6-275P-201ENST00000364910 107 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 SNORD116-13-201ENST00000384408 92 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNU6-376P-201ENST00000384731 106 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNA5SP511-201ENST00000410487 115 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RPL23AP83-201ENST00000434984 473 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNU6-437P-201ENST00000459408 95 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RPL23AP54-201ENST00000495129 419 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 RNU6-1219P-201ENST00000516143 112 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 AC022559.1-201ENST00000520905 205 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 AL358944.1-201ENST00000528537 144 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
VSX1Q9NZR4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX1Q9NZR4 Y_RNA.24-201ENST00000362508 103 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNU2-2P-201ENST00000410396 191 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.32□□□□□ -2.04
VSX1Q9NZR4 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 SUMO1P3-201ENST00000439961 304 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNA5SP282-201ENST00000516355 108 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNU1-142P-201ENST00000516682 145 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNA5SP137-201ENST00000516833 135 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 EIF4BP1-201ENST00000554881 351 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 MIR3126-201ENST00000577443 74 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 MIR4658-201ENST00000584344 65 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 RNU2-4P-201ENST00000606190 192 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX1Q9NZR4 MIR338-201ENST00000636369 67 ntBASIC2.32□□□□□ -2.04
VSX1Q9NZR4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VSX1Q9NZR4 SNORA80A-201ENST00000363922 136 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 RNU6-969P-201ENST00000383900 105 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 RNU6-578P-201ENST00000390980 103 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 RNU6-394P-201ENST00000410735 107 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC105272.1-201ENST00000438604 198 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC107083.1-201ENST00000439643 279 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.31□□□□□ -2.04
VSX1Q9NZR4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC023449.1-201ENST00000454464 154 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC091021.1-201ENST00000468051 388 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 RNU6-126P-201ENST00000516685 103 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 MTND1P7-201ENST00000632801 297 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VSX1Q9NZR4 AL365361.1-201ENST00000566942 3481 ntBASIC2.31□□□□□ -2.04
VSX1Q9NZR4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
VSX1Q9NZR4 AC018630.2-201ENST00000534866 2403 ntBASIC2.3□□□□□ -2.04
VSX1Q9NZR4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VSX1Q9NZR4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VSX1Q9NZR4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VSX1Q9NZR4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VSX1Q9NZR4 RNY1P5-201ENST00000383890 115 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms