Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNA5SP367-201ENST00000516557 118 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-521P-201ENST00000516663 105 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 RN7SKP209-201ENST00000516888 304 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AC068657.1-201ENST00000520807 306 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AC008507.4-201ENST00000585464 127 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AL356280.1-201ENST00000603614 379 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AC021443.1-201ENST00000604478 211 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AC005000.2-201ENST00000605468 310 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 IGLL4P-201ENST00000614590 133 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 U6.105-201ENST00000637379 88 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 Z83843.1-201ENST00000604070 3685 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.10-201ENST00000362371 110 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-349P-201ENST00000362402 107 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 RNU1-18P-201ENST00000363062 164 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.221-201ENST00000364248 96 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.244-201ENST00000364484 109 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 MT-TI-201ENST00000387365 69 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 FO393413.1-201ENST00000402892 195 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 RPL39P25-201ENST00000449384 154 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 CYP2C59P-201ENST00000457790 269 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.666-201ENST00000516187 112 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 FAM71BP1-201ENST00000604431 523 ntBASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CUEDC1Q9NWM3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 CEP170P1-201ENST00000502249 4587 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 RNY3P2-201ENST00000362918 102 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 U8.11-201ENST00000384699 133 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.601-201ENST00000410500 113 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 RNU2-63P-201ENST00000410792 194 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 U8.18-201ENST00000459285 133 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 MIR449C-201ENST00000516047 92 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-586P-201ENST00000517265 104 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 AC004486.1-201ENST00000546846 233 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 AC013412.1-201ENST00000610687 192 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 MIR7975-201ENST00000619350 68 ntBASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CUEDC1Q9NWM3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.290-201ENST00000364879 114 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 SNORA4.2-201ENST00000365313 147 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-1276P-201ENST00000365372 104 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 MIR518F-201ENST00000384973 87 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RNU11-5P-201ENST00000391216 129 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-279P-201ENST00000391297 101 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 SNRPGP10-201ENST00000432323 225 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 UBBP3-201ENST00000445497 241 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RPL23AP67-201ENST00000465341 474 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 RNA5SP490-201ENST00000517141 136 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 SUMO2P16-201ENST00000519475 264 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 AL449363.1-201ENST00000617815 186 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 FAM35CP-201ENST00000554755 2470 ntBASIC3.61□□□□□ -1.83
CUEDC1Q9NWM3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-418P-201ENST00000384035 107 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-972P-201ENST00000391208 107 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 AC096949.1-201ENST00000412047 152 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 AL133162.1-201ENST00000463228 453 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 RN7SL293P-201ENST00000481765 281 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 AL359075.3-201ENST00000613288 217 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 MIR376A2-201ENST00000636782 80 ntBASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUEDC1Q9NWM3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 SNORD56.5-201ENST00000364281 72 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 SNORA2.2-201ENST00000365473 135 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-816P-201ENST00000390914 107 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-1268P-201ENST00000391214 107 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 U8.17-201ENST00000391292 132 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-1239P-201ENST00000391310 107 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 AC104332.2-201ENST00000429959 156 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 AC091826.1-201ENST00000514065 313 ntBASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms