Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU2-12P-201ENST00000517216 168 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 MIR4795-201ENST00000584182 89 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 AC127459.3-201ENST00000624328 466 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 U6.92-201ENST00000636464 89 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1115P-201ENST00000362490 106 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.146-201ENST00000363549 102 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 SNORD115-30-201ENST00000364117 82 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-20P-201ENST00000384106 107 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.496-201ENST00000384444 101 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 RNU4-62P-201ENST00000410125 130 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AF228730.4-201ENST00000421457 183 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-966P-201ENST00000516479 104 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 RNU2-56P-201ENST00000516826 190 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 MIR4778-201ENST00000577635 80 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AC091178.2-201ENST00000584401 117 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AL078604.3-201ENST00000615580 211 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AC106754.2-201ENST00000623006 233 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 SNORD3E-202ENST00000627253 216 ntBASIC1.17□□□□□ -2.22
EXOSC3Q9NQT5 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 SNORA1B-201ENST00000362535 133 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU4-73P-201ENST00000363164 141 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-626P-201ENST00000363354 107 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-117P-201ENST00000365415 107 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-482P-201ENST00000391068 107 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 SDAD1P3-201ENST00000427380 333 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC236972.2-201ENST00000434979 310 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC233266.1-201ENST00000454518 96 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU7-95P-201ENST00000459222 64 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 MTND3P22-201ENST00000510932 243 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC005176.2-201ENST00000596933 147 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC092447.9-201ENST00000603395 144 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC242852.1-201ENST00000612151 96 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC073349.3-201ENST00000617616 186 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 AC244015.1-201ENST00000622301 99 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 MIR4272-201ENST00000635924 64 ntBASIC1.16□□□□□ -2.22
EXOSC3Q9NQT5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
EXOSC3Q9NQT5 AC005592.1-201ENST00000566527 1640 ntBASIC1.15□□□□□ -2.22
EXOSC3Q9NQT5 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 SNX2P2-201ENST00000424553 323 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 RPEP5-201ENST00000441137 268 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 AC009474.2-201ENST00000451383 136 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-341P-201ENST00000516973 96 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 MIR4524B-201ENST00000581569 115 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 VN1R91P-201ENST00000594377 169 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 AC006380.1-201ENST00000603598 186 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 AC240442.1-201ENST00000616055 283 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.23
EXOSC3Q9NQT5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.27-201ENST00000362540 103 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-324P-201ENST00000363957 106 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.315-201ENST00000365117 102 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-505P-201ENST00000384427 107 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.579-201ENST00000390939 94 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 AL031003.1-201ENST00000404229 172 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNA5SP511-201ENST00000410487 115 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 MTATP6P23-201ENST00000440153 476 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-155P-201ENST00000516347 100 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-911P-201ENST00000516523 104 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 CYP3A52P-201ENST00000563326 91 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 AL162424.1-201ENST00000602325 221 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 SNORA28-201ENST00000606769 126 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 MIR6715A-201ENST00000615929 79 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 AL513423.1-201ENST00000621695 132 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
EXOSC3Q9NQT5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.5-201ENST00000362334 102 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.80-201ENST00000362996 102 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.446-201ENST00000384178 104 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 Y_RNA.485-201ENST00000384395 102 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 MIR660-201ENST00000385235 97 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 RNU2-54P-201ENST00000410299 190 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 SUMO1P2-201ENST00000452524 304 ntBASIC1.13□□□□□ -2.23
EXOSC3Q9NQT5 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms