Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 MIR3145-201ENST00000580727 82 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.84-201ENST00000363011 104 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 RNU6-290P-201ENST00000365212 101 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 MIR520A-201ENST00000384862 85 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 IGKV3-31-201ENST00000523109 329 ntBASIC1.8□□□□□ -2.12
HINT3Q9NQE9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
HINT3Q9NQE9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.79□□□□□ -2.12
HINT3Q9NQE9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HINT3Q9NQE9 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.47-201ENST00000362697 108 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.149-201ENST00000363558 117 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.418-201ENST00000384029 102 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 SNORA67.3-201ENST00000384366 140 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.569-201ENST00000384749 103 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 AL023284.1-201ENST00000403956 276 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 MIR1261-201ENST00000408659 82 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RNU6-710P-201ENST00000410424 105 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 AC009310.1-201ENST00000414414 451 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 AC024067.1-201ENST00000426199 223 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RNA5SP233-201ENST00000459153 113 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 HMGN1P10-201ENST00000474557 553 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RNU6-63P-201ENST00000516690 95 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RNU6-570P-201ENST00000517051 105 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 RPL21P9-201ENST00000556149 474 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 MIR4299-201ENST00000577899 72 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 MIR8062-201ENST00000621515 85 ntBASIC1.79□□□□□ -2.12
HINT3Q9NQE9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HINT3Q9NQE9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HINT3Q9NQE9 AC092881.1-201ENST00000638218 2733 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RNU4-80P-201ENST00000363200 141 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.136-201ENST00000363444 102 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.376-201ENST00000365638 108 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RNU6-376P-201ENST00000384731 106 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RNU6-855P-201ENST00000410395 104 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RNU6-1203P-201ENST00000410703 110 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.78□□□□□ -2.12
HINT3Q9NQE9 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 MTCO2P24-201ENST00000515611 426 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 AC005034.5-201ENST00000604219 466 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 AC010900.2-201ENST00000604508 210 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
HINT3Q9NQE9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
HINT3Q9NQE9 AC018630.2-201ENST00000534866 2403 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.16-201ENST00000362421 102 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 SNORD116-13-201ENST00000384408 92 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 RNU6-136P-201ENST00000384663 107 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 RNU2-7P-201ENST00000410794 178 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 RPS27P1-201ENST00000450552 247 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 RNA5SP437-201ENST00000517249 129 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.77□□□□□ -2.13
HINT3Q9NQE9 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 AC022217.4-201ENST00000604389 163 ntBASIC1.77□□□□□ -2.13
HINT3Q9NQE9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
HINT3Q9NQE9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HINT3Q9NQE9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
HINT3Q9NQE9 SNORA53-201ENST00000391141 249 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 RNA5SP511-201ENST00000410487 115 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 MTCYBP9-201ENST00000431021 303 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HINT3Q9NQE9 MTND3P2-201ENST00000438452 342 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 TRBVB-201ENST00000477100 408 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 RNU2-31P-201ENST00000516954 155 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 AL161670.1-201ENST00000554348 137 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 AC015720.1-201ENST00000565251 277 ntBASIC1.76□□□□□ -2.13
HINT3Q9NQE9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.76□□□□□ -2.13
HINT3Q9NQE9 MIR6079-201ENST00000635807 62 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms