Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.56□□□□□ -2
VTA1Q9NP79 RNU6-1272P-201ENST00000362776 107 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 SNORD27-201ENST00000363981 72 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU6-740P-201ENST00000364734 105 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 Y_RNA.277-201ENST00000364754 102 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 Y_RNA.287-201ENST00000364853 94 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 Y_RNA.477-201ENST00000384352 108 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU6-1289P-201ENST00000384431 106 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 MIR518A2-201ENST00000384966 87 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 Y_RNA.590-201ENST00000410140 107 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU7-94P-201ENST00000459576 63 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU6-1041P-201ENST00000516254 102 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 Y_RNA.680-201ENST00000516441 93 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU6-1337P-201ENST00000516525 95 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 AC073349.3-201ENST00000617616 186 ntBASIC2.56□□□□□ -2
VTA1Q9NP79 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VTA1Q9NP79 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VTA1Q9NP79 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.56□□□□□ -2
VTA1Q9NP79 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
VTA1Q9NP79 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 Y_RNA.257-201ENST00000364596 102 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 AL117342.1-201ENST00000404861 406 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 AC108059.2-201ENST00000434626 151 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.55□□□□□ -2
VTA1Q9NP79 SNORD2.1-201ENST00000458762 69 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 Y_RNA.679-201ENST00000516416 91 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 RNU1-142P-201ENST00000516682 145 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 RNU7-172P-201ENST00000517125 64 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 AP005660.1-201ENST00000522972 293 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 U1.36-201ENST00000620684 176 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 MIR6766-201ENST00000622641 72 ntBASIC2.55□□□□□ -2
VTA1Q9NP79 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VTA1Q9NP79 Y_RNA.122-201ENST00000363331 96 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 Y_RNA.124-201ENST00000363339 93 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 RNU6-899P-201ENST00000363947 107 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 RNU6-117P-201ENST00000365415 107 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 RNU6-1323P-201ENST00000384025 107 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 Y_RNA.539-201ENST00000384635 107 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 RNU6-417P-201ENST00000384712 107 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 AC069257.2-201ENST00000441819 155 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.54□□□□□ -2
VTA1Q9NP79 MIR4529-201ENST00000578110 78 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 MIR5688-201ENST00000580619 83 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
VTA1Q9NP79 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
VTA1Q9NP79 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
VTA1Q9NP79 SNORD115-3-201ENST00000363100 82 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 RNU6-144P-201ENST00000383951 107 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 SNORA72.4-201ENST00000384174 132 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
VTA1Q9NP79 RNU11-3P-201ENST00000391111 133 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 MTND2P29-201ENST00000438595 412 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 RPS20P10-201ENST00000451209 253 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 Y_RNA.638-201ENST00000459374 113 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.53□□□□□ -2
VTA1Q9NP79 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
VTA1Q9NP79 Y_RNA.700-201ENST00000516806 100 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 RNU6-111P-201ENST00000517179 105 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 AC027419.1-201ENST00000522976 328 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.53□□□□□ -2
VTA1Q9NP79 MIR4769-201ENST00000584126 77 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
VTA1Q9NP79 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
VTA1Q9NP79 RNU6-801P-201ENST00000364087 105 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 RNU6-662P-201ENST00000384253 104 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 SNORA64-201ENST00000384674 134 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VTA1Q9NP79 AL355497.1-201ENST00000406262 551 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.52□□□□□ -2.01
VTA1Q9NP79 EBAG9P1-201ENST00000418955 543 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AL162725.1-201ENST00000435405 301 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.52□□□□□ -2.01
VTA1Q9NP79 RNU6-388P-201ENST00000517012 105 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 RNU6-389P-201ENST00000517048 105 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AC009779.6-201ENST00000603972 165 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AC010900.2-201ENST00000604508 210 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 AL442067.1-201ENST00000613261 223 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.52□□□□□ -2.01
VTA1Q9NP79 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VTA1Q9NP79 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
VTA1Q9NP79 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VTA1Q9NP79 RNU4-13P-201ENST00000364019 141 ntBASIC2.51□□□□□ -2.01
VTA1Q9NP79 RNU6-1318P-201ENST00000365389 103 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms