Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 MIR410-201ENST00000362222 80 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6-1188P-201ENST00000363795 107 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6-890P-201ENST00000384121 107 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.505-201ENST00000384489 102 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6-1156P-201ENST00000410365 100 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 MRPS18CP6-201ENST00000423587 223 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RPEP5-201ENST00000441137 268 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 UBE2V1P7-201ENST00000446395 340 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 MTCO3P10-201ENST00000455912 772 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU7-169P-201ENST00000459456 61 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6-966P-201ENST00000516479 104 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU2-56P-201ENST00000516826 190 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RNU6-341P-201ENST00000516973 96 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 CYCSP23-201ENST00000519781 313 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 RAB11AP2-201ENST00000545905 639 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 AC005899.2-201ENST00000584353 90 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 AL117336.2-201ENST00000602435 335 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 AC005828.6-201ENST00000606610 232 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 AC004467.1-201ENST00000615678 330 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 U6atac.1-201ENST00000616025 117 ntBASIC0.84□□□□□ -2.27
HMG20AQ9NP66 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.84□□□□□ -2.27
HMG20AQ9NP66 MIRLET7C-201ENST00000362160 84 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.390-201ENST00000383932 102 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.474-201ENST00000384341 102 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 MIR873-201ENST00000401120 77 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.592-201ENST00000410274 109 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 RNA5SP511-201ENST00000410487 115 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 Z98949.2-201ENST00000440996 144 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.635-201ENST00000459041 101 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 RNU6-1096P-201ENST00000517089 102 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AL162424.1-201ENST00000602325 221 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AC011476.5-201ENST00000615594 130 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AC022306.2-201ENST00000617563 647 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 AC127459.3-201ENST00000624328 466 ntBASIC0.83□□□□□ -2.28
HMG20AQ9NP66 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
HMG20AQ9NP66 RNU6-199P-201ENST00000362954 107 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.101-201ENST00000363154 102 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.166-201ENST00000363730 102 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.172-201ENST00000363765 102 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 RNU4-41P-201ENST00000364426 143 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.327-201ENST00000365201 102 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 RNU6-708P-201ENST00000384217 107 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 SNORA75.6-201ENST00000391318 127 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 FGF7P8-201ENST00000402994 292 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 RNU5A-5P-201ENST00000411054 116 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 MTND4P28-201ENST00000426217 387 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 AC092473.1-201ENST00000441098 221 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 RNA5SP404-201ENST00000517118 132 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 SNORA28-201ENST00000606769 126 ntBASIC0.82□□□□□ -2.28
HMG20AQ9NP66 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HMG20AQ9NP66 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 SNORD115-30-201ENST00000364117 82 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 RNU6-53P-201ENST00000365367 106 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 RNU6-1080P-201ENST00000383982 107 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 SNORA25-201ENST00000384384 134 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.577-201ENST00000384794 101 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 MIR653-201ENST00000385279 96 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 SNORA69.1-201ENST00000390904 137 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AC096644.2-201ENST00000429278 159 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AC108729.3-201ENST00000513484 108 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 RNU2-12P-201ENST00000517216 168 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AP002004.2-201ENST00000531656 154 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AL513534.2-201ENST00000603836 250 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 snoU13.31-201ENST00000607291 104 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 MTND4LP32-201ENST00000636111 270 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
HMG20AQ9NP66 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.8□□□□□ -2.28
HMG20AQ9NP66 CHEK2P4-201ENST00000450340 246 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6-470P-201ENST00000515954 104 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6-1278P-201ENST00000516130 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms