Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 MIR539-201ENST00000365690 78 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MSL2Q9HCI7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MSL2Q9HCI7 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 SNORA12.1-201ENST00000390873 148 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 Y_RNA.584-201ENST00000391090 114 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 AC060773.1-201ENST00000421698 310 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 AC023449.1-201ENST00000454464 154 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 CYP2C59P-201ENST00000457790 269 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 AC096725.1-201ENST00000514266 313 ntBASIC2.55□□□□□ -2
MSL2Q9HCI7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.55□□□□□ -2
MSL2Q9HCI7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
MSL2Q9HCI7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.55□□□□□ -2
MSL2Q9HCI7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.54□□□□□ -2
MSL2Q9HCI7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.54□□□□□ -2
MSL2Q9HCI7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNA5SP467-201ENST00000391274 118 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 UQCRHP3-201ENST00000451503 251 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RN7SL633P-201ENST00000488974 297 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 RNU4-57P-201ENST00000515980 135 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
MSL2Q9HCI7 AC005000.2-201ENST00000605468 310 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MSL2Q9HCI7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
MSL2Q9HCI7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
MSL2Q9HCI7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.54□□□□□ -2
MSL2Q9HCI7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.54□□□□□ -2
MSL2Q9HCI7 GABRG2-229ENST00000641017 3628 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 MAPK10-322ENST00000641485 4530 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 AL365361.1-201ENST00000566942 3481 ntBASIC2.54□□□□□ -2
MSL2Q9HCI7 AL161431.1-201ENST00000618966 4205 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
MSL2Q9HCI7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
MSL2Q9HCI7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
MSL2Q9HCI7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
MSL2Q9HCI7 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 Y_RNA.629-201ENST00000411368 105 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 RN7SKP101-201ENST00000411376 320 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 AC123900.1-201ENST00000420390 96 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 MTCO1P44-201ENST00000441935 243 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.53□□□□□ -2
MSL2Q9HCI7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.53□□□□□ -2
MSL2Q9HCI7 RNU6-197P-201ENST00000516680 100 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 AC018630.3-201ENST00000542637 96 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 MTND5P34-201ENST00000568888 325 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
MSL2Q9HCI7 Pinc.1-201ENST00000616452 154 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.53□□□□□ -2
MSL2Q9HCI7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
MSL2Q9HCI7 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 RNU6-508P-201ENST00000363231 103 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 RNU6-1325P-201ENST00000364905 105 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 Y_RNA.353-201ENST00000365440 108 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 RNA5SP323-201ENST00000391094 133 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 RNA5SP496-201ENST00000391240 109 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 EDDM3CP-201ENST00000415977 425 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 AC010154.1-201ENST00000425857 269 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 S100A11P2-201ENST00000467589 312 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.52□□□□□ -2.01
MSL2Q9HCI7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 RNU6-1061P-201ENST00000516530 99 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 MIR5688-201ENST00000580619 83 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 uc_338.4-201ENST00000616635 176 ntBASIC2.52□□□□□ -2.01
MSL2Q9HCI7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.52□□□□□ -2.01
MSL2Q9HCI7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.52□□□□□ -2.01
MSL2Q9HCI7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 SNORA63.4-201ENST00000362763 126 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 SNORA25.7-201ENST00000364375 127 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 SNORA68.1-201ENST00000364537 132 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 RNU6-484P-201ENST00000384016 107 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 RNY3P5-201ENST00000384127 102 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 AL035461.1-201ENST00000421490 332 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 RPL36AP21-201ENST00000490372 323 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 YWHAEP4-201ENST00000505390 198 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 AC011406.1-201ENST00000512440 370 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 RNU7-149P-201ENST00000516739 59 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 MIR3646-201ENST00000578301 84 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 MIR4298-201ENST00000584380 73 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 U7.2-201ENST00000607576 63 ntBASIC2.51□□□□□ -2.01
MSL2Q9HCI7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.51□□□□□ -2.01
MSL2Q9HCI7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms