Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR29B2-201ENST00000385055 81 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AL031003.1-201ENST00000404229 172 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 U6atac.2-201ENST00000408644 118 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-257P-201ENST00000410238 98 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU6-479P-201ENST00000516348 105 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AC136628.3-201ENST00000521868 290 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 MIR5194-201ENST00000582634 120 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RPL17P51-201ENST00000605218 238 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AC005562.2-201ENST00000618264 111 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.778-201ENST00000620203 90 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
EBF3Q9H4W6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF3Q9H4W6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EBF3Q9H4W6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EBF3Q9H4W6 RNU1-72P-201ENST00000362976 153 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 SNORD32B-201ENST00000364460 84 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 SNORA12-201ENST00000391162 147 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 RNU7-121P-201ENST00000516604 62 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 RNU6-344P-201ENST00000516635 111 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 RNU6-453P-201ENST00000516819 85 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 RNU1-117P-201ENST00000517041 158 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 SCARNA3-201ENST00000517097 143 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AL670379.2-201ENST00000604983 252 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AL078604.3-201ENST00000615580 211 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC013791.1-201ENST00000616619 62 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC068205.3-201ENST00000636385 468 ntBASIC2.32□□□□□ -2.04
EBF3Q9H4W6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF3Q9H4W6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 RNU6-1168P-201ENST00000390831 104 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 RNU6-1154P-201ENST00000391001 104 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 RPL30P4-201ENST00000429309 333 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AL591806.2-201ENST00000433122 173 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC005840.1-201ENST00000498412 377 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 MIR5006-201ENST00000583027 110 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC006380.1-201ENST00000603598 186 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 SNORD11B-201ENST00000607707 90 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 AC091895.1-201ENST00000624494 256 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 MIR3658-201ENST00000636291 56 ntBASIC2.31□□□□□ -2.04
EBF3Q9H4W6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
EBF3Q9H4W6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 SNORA72.4-201ENST00000384174 132 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 MIR626-201ENST00000385032 94 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 RNU6-239P-201ENST00000390990 99 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 RNU6-1248P-201ENST00000391096 64 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 RNU2-44P-201ENST00000516795 194 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 U6.115-201ENST00000636045 103 ntBASIC2.3□□□□□ -2.04
EBF3Q9H4W6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
EBF3Q9H4W6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.81-201ENST00000362997 102 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.261-201ENST00000364631 102 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 SNORD50B-201ENST00000364995 70 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.357-201ENST00000365487 109 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 MIR548B-201ENST00000385247 97 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 RNU6-578P-201ENST00000390980 103 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AL445687.1-201ENST00000439946 251 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AC010409.1-201ENST00000487382 476 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AC015712.3-201ENST00000559380 164 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
EBF3Q9H4W6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
EBF3Q9H4W6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms