Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNRPGP19-201ENST00000603826 189 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 AC004792.1-201ENST00000614523 137 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 snoU18.1-201ENST00000629629 71 ntBASIC2.17□□□□□ -2.06
CDT1Q9H211 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDT1Q9H211 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDT1Q9H211 UBE2WP1-201ENST00000362030 340 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 MIR340-201ENST00000362125 95 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 Y_RNA.150-201ENST00000363562 102 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 Y_RNA.200-201ENST00000364018 102 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 Y_RNA.217-201ENST00000364214 105 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 MTCO1P44-201ENST00000441935 243 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 Y_RNA.641-201ENST00000459414 105 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 AC010531.2-201ENST00000465012 153 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 SNORA81.3-201ENST00000517283 198 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.16□□□□□ -2.06
CDT1Q9H211 AL162424.1-201ENST00000602325 221 ntBASIC2.16□□□□□ -2.06
CDT1Q9H211 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDT1Q9H211 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDT1Q9H211 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CDT1Q9H211 SNORA25.1-201ENST00000362326 128 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 Y_RNA.172-201ENST00000363765 102 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 Y_RNA.199-201ENST00000364014 102 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 SNORD115-30-201ENST00000364117 82 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 RNU6-1264P-201ENST00000383891 107 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 Y_RNA.785-201ENST00000384290 109 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 EDDM3CP-201ENST00000415977 425 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 AL390729.2-201ENST00000416137 156 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 PIGPP3-201ENST00000425307 415 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 Y_RNA.637-201ENST00000459424 114 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 AC026271.5-201ENST00000577873 130 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 U6.115-201ENST00000636045 103 ntBASIC2.15□□□□□ -2.07
CDT1Q9H211 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDT1Q9H211 Y_RNA.83-201ENST00000363005 113 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 RNU6-801P-201ENST00000364087 105 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 Y_RNA.243-201ENST00000364481 109 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 RNU6-209P-201ENST00000384118 107 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 MIR1185-2-201ENST00000408687 86 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 RN7SKP51-201ENST00000410781 304 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 RNU6-57P-201ENST00000411348 103 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.14□□□□□ -2.07
CDT1Q9H211 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.14□□□□□ -2.07
CDT1Q9H211 NDUFB4P10-201ENST00000452541 359 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 U8.19-201ENST00000459095 133 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC114982.1-201ENST00000469402 321 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.14□□□□□ -2.07
CDT1Q9H211 RNU6-948P-201ENST00000516374 107 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.14□□□□□ -2.07
CDT1Q9H211 CBX3P4-201ENST00000538909 354 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AC078899.2-201ENST00000595282 212 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 AL008718.3-201ENST00000610217 321 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.14□□□□□ -2.07
CDT1Q9H211 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CDT1Q9H211 MIR411-201ENST00000362239 96 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.82-201ENST00000363000 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.92-201ENST00000363043 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.99-201ENST00000363138 105 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RNU6-1048P-201ENST00000364054 107 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 SNORD114-6-201ENST00000364393 72 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.235-201ENST00000364412 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.306-201ENST00000365015 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.312-201ENST00000365089 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.322-201ENST00000365151 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.338-201ENST00000365320 114 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RNU6-1310P-201ENST00000384153 107 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RNU6-493P-201ENST00000391321 108 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 PCNPP3-201ENST00000393579 471 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AL031003.1-201ENST00000404229 172 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RNU2-61P-201ENST00000411069 191 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AC074290.1-201ENST00000448883 135 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 SNORD2.1-201ENST00000458762 69 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.650-201ENST00000459002 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.644-201ENST00000459006 113 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.674-201ENST00000516362 113 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 SNORA31.11-201ENST00000516528 139 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.777-201ENST00000516982 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AC087441.2-201ENST00000529141 262 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AC024405.2-202ENST00000532731 184 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AL512605.2-201ENST00000592972 256 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.771-201ENST00000598668 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
CDT1Q9H211 AL365434.2-201ENST00000607979 234 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 FTX_2.1-201ENST00000618816 94 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 Y_RNA.789-201ENST00000622480 102 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 snoZ196.1-201ENST00000625269 89 ntBASIC2.13□□□□□ -2.07
CDT1Q9H211 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.13□□□□□ -2.07
CDT1Q9H211 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
CDT1Q9H211 RNU6-324P-201ENST00000363957 106 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms