Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 Y_RNA.535-201ENST00000384612 99 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 MT-TD-201ENST00000387419 68 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AL354751.2-201ENST00000415471 210 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC236972.2-201ENST00000434979 310 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC099799.1-201ENST00000439809 192 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC010655.3-201ENST00000478818 450 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 RNU6-1137P-201ENST00000517073 99 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC018448.1-201ENST00000552843 316 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCSER1Q9C0I3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 MIR369-201ENST00000362155 70 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 SNORD42.2-201ENST00000365570 69 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 SNORD12B-201ENST00000410433 91 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AC096644.2-201ENST00000429278 159 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 SNORA40.9-201ENST00000515895 93 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 RNU6-699P-201ENST00000517081 110 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AP002001.1-203ENST00000534002 267 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 MIR3684-201ENST00000579779 74 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 AC006435.5-201ENST00000624486 112 ntBASIC1.28□□□□□ -2.2
CCSER1Q9C0I3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 RN7SKP200-201ENST00000410564 320 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.605-201ENST00000410577 105 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC022028.1-201ENST00000412054 408 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 PMCHL1-202ENST00000423102 261 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 MTCYBP6-201ENST00000441810 138 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC010598.1-201ENST00000510378 103 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AL137100.2-201ENST00000555786 315 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC020661.2-201ENST00000560114 134 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC055872.1-201ENST00000570978 278 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 SNORD58B-201ENST00000607313 66 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC007485.1-201ENST00000616755 206 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 U6.73-201ENST00000619194 103 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AC091925.1-201ENST00000623204 462 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 AL008636.1-201ENST00000625038 1018 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 U6.108-201ENST00000637764 58 ntBASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 SNORA4.2-201ENST00000365313 147 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 RNA5SP259-201ENST00000365541 109 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 RPL21P1-201ENST00000399532 476 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 PGBD4P5-201ENST00000445958 426 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 RNU6-625P-201ENST00000459412 107 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 AC093852.1-201ENST00000503587 266 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 RNU6-911P-201ENST00000516523 104 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 AL442163.3-201ENST00000554110 156 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 MIR3674-201ENST00000636576 68 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 AC099654.10-201ENST00000640395 161 ntBASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCSER1Q9C0I3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 RNY3P4-201ENST00000384428 101 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 RAB28P5-201ENST00000427490 651 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 RNU7-169P-201ENST00000459456 61 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 AL512310.8-201ENST00000550183 120 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 U2.1-201ENST00000618978 145 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 uc_338.22-201ENST00000622722 187 ntBASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.25□□□□□ -2.21
CCSER1Q9C0I3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.26-201ENST00000362539 101 ntBASIC1.24□□□□□ -2.21
CCSER1Q9C0I3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.24□□□□□ -2.21
CCSER1Q9C0I3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.24□□□□□ -2.21
CCSER1Q9C0I3 AL355796.1-201ENST00000406706 323 ntBASIC1.24□□□□□ -2.21
CCSER1Q9C0I3 RNA5SP475-201ENST00000410568 110 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms