Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR548AB-201ENST00000584917 84 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AL022161.1-201ENST00000604390 213 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AC087683.2-201ENST00000611384 326 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AC104260.1-201ENST00000616660 539 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.23□□□□□ -2.45
TRIM4Q9C037 SNORA20B-201ENST00000384220 132 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 MIR136-201ENST00000385207 82 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AC243428.1-201ENST00000421099 264 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.23□□□□□ -2.45
TRIM4Q9C037 MTND1P4-201ENST00000435196 415 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 SEPT7P4-201ENST00000437076 306 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AC091885.1-201ENST00000506658 268 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 RNA5SP94-201ENST00000516917 108 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AL358944.1-201ENST00000528537 144 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.23□□□□□ -2.45
TRIM4Q9C037 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRIM4Q9C037 AC012433.1-201ENST00000588916 398 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 MIR8076-201ENST00000611401 83 ntBASIC-0.23□□□□□ -2.45
TRIM4Q9C037 RNU6-674P-201ENST00000363831 107 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 RNU6-456P-201ENST00000384493 107 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 MIR521-1-201ENST00000384902 87 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 AL353997.1-201ENST00000432936 108 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRIM4Q9C037 AC091144.1-201ENST00000519573 138 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 ELOCP32-201ENST00000548625 324 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRIM4Q9C037 AC068137.4-201ENST00000638485 296 ntBASIC-0.24□□□□□ -2.45
TRIM4Q9C037 SNORD68-201ENST00000363214 84 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 RNA5SP128-201ENST00000365305 116 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 RNU6-282P-201ENST00000365357 103 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 AC018865.2-201ENST00000423631 129 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRIM4Q9C037 SCARNA8-201ENST00000515924 131 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 RNA5SP20-201ENST00000515976 84 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 SNORA40.12-201ENST00000516329 111 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 MIR2115-201ENST00000516657 100 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 AP002963.1-201ENST00000530590 184 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 MIR8064-201ENST00000612863 90 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 MIR4251-201ENST00000635819 61 ntBASIC-0.25□□□□□ -2.45
TRIM4Q9C037 RNU6-407P-201ENST00000365280 104 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 MIR513B-201ENST00000385136 84 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 RNU2-9P-201ENST00000410194 145 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 RNU6-325P-201ENST00000411132 105 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 AL359672.1-201ENST00000442302 409 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 snoU13.21-201ENST00000459368 105 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 AC018710.1-201ENST00000506509 158 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 AC007751.1-201ENST00000529260 376 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRIM4Q9C037 AC087683.1-201ENST00000591187 441 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 TUSC7.1-201ENST00000610969 165 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 uc_338.16-201ENST00000621804 95 ntBASIC-0.26□□□□□ -2.45
TRIM4Q9C037 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 AC117470.1-201ENST00000381974 330 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 SNORA8.2-201ENST00000384372 139 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 MIR15B-201ENST00000385045 98 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 MIR644A-201ENST00000385262 94 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 SNORA75.6-201ENST00000391318 127 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 RNU4-63P-201ENST00000411313 118 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 RNU7-180P-201ENST00000459240 63 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 SNORD123-201ENST00000459473 70 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.27□□□□□ -2.45
TRIM4Q9C037 CCDC34P1-201ENST00000507441 517 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 IGKV1-22-201ENST00000524313 326 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRIM4Q9C037 HULC.1-201ENST00000612720 240 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 AC009161.2-201ENST00000624626 138 ntBASIC-0.27□□□□□ -2.45
TRIM4Q9C037 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRIM4Q9C037 RNU6-929P-201ENST00000384429 107 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 MIR938-201ENST00000401216 83 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AL590632.1-201ENST00000424289 371 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AC015818.7-201ENST00000428754 109 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 Z82188.1-201ENST00000436709 154 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AC087499.7-201ENST00000441958 109 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
TRIM4Q9C037 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.28□□□□□ -2.45
TRIM4Q9C037 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRIM4Q9C037 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRIM4Q9C037 CPDP1-201ENST00000579660 283 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 AL158209.2-201ENST00000619266 216 ntBASIC-0.28□□□□□ -2.45
TRIM4Q9C037 SNORA27.1-201ENST00000362604 124 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 RNU4-9P-201ENST00000364951 139 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 RNU6-517P-201ENST00000384362 110 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 RNU6-138P-201ENST00000515952 107 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 MTND2P38-201ENST00000522536 667 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 MIR4804-201ENST00000581683 73 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 AC245014.2-201ENST00000603689 287 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 AC246785.4-201ENST00000605374 287 ntBASIC-0.29□□□□□ -2.46
TRIM4Q9C037 SNORD115-32-201ENST00000364079 82 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 RNU6-934P-201ENST00000365154 107 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 MIR593-201ENST00000384856 100 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 AL390729.2-201ENST00000416137 156 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms