Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 MTCO1P44-201ENST00000441935 243 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC009238.1-201ENST00000442165 424 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC009237.6-201ENST00000446969 424 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC010409.1-201ENST00000487382 476 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NDC1Q9BTX1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
NDC1Q9BTX1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
NDC1Q9BTX1 SNORD116-25-201ENST00000516517 92 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 RNU7-121P-201ENST00000516604 62 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.55□□□□□ -2
NDC1Q9BTX1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
NDC1Q9BTX1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.55□□□□□ -2
NDC1Q9BTX1 POLR3GP1-201ENST00000594073 261 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AP003357.1-201ENST00000604497 148 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 AC005972.2-201ENST00000604690 348 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 U4atac.1-201ENST00000618345 95 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
NDC1Q9BTX1 MIR367-201ENST00000362299 68 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 RNU6-151P-201ENST00000364158 107 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 Y_RNA.488-201ENST00000384403 102 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 RNU6-131P-201ENST00000391144 107 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 RNA5SP508-201ENST00000411327 119 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 UBBP3-201ENST00000445497 241 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 RPL36AP21-201ENST00000490372 323 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.54□□□□□ -2
NDC1Q9BTX1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
NDC1Q9BTX1 AL391903.3-201ENST00000612158 163 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 Y_RNA.778-201ENST00000620203 90 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 AC006435.5-201ENST00000624486 112 ntBASIC2.54□□□□□ -2
NDC1Q9BTX1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
NDC1Q9BTX1 Y_RNA.215-201ENST00000364204 112 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 Y_RNA.343-201ENST00000365354 112 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 RNU6-81P-201ENST00000365608 104 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 Y_RNA.497-201ENST00000384447 98 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 RNA5SP511-201ENST00000410487 115 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 AL135786.1-201ENST00000415892 214 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 AL121914.1-201ENST00000450188 156 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 RPS27P22-201ENST00000478056 241 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.53□□□□□ -2
NDC1Q9BTX1 AC127455.1-201ENST00000565496 145 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
NDC1Q9BTX1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AL606845.1-201ENST00000404881 255 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 RPL23AP54-201ENST00000495129 419 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC107027.2-201ENST00000512197 115 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 RNU6-561P-201ENST00000516222 102 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 SNORA31.26-201ENST00000517250 137 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 AC015720.1-201ENST00000565251 277 ntBASIC2.52□□□□□ -2.01
NDC1Q9BTX1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NDC1Q9BTX1 Y_RNA.291-201ENST00000364886 113 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU6-117P-201ENST00000365415 107 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 U8.9-201ENST00000365667 134 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU6-136P-201ENST00000384663 107 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 Y_RNA.568-201ENST00000384742 113 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 AC010154.1-201ENST00000425857 269 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.51□□□□□ -2.01
NDC1Q9BTX1 AL162725.1-201ENST00000435405 301 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU6-426P-201ENST00000516464 97 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU7-116P-201ENST00000516940 62 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 RNU6-856P-201ENST00000516959 98 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
NDC1Q9BTX1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NDC1Q9BTX1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NDC1Q9BTX1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NDC1Q9BTX1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.5□□□□□ -2.01
NDC1Q9BTX1 MIR15B-201ENST00000385045 98 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 AC006461.1-201ENST00000412637 326 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 RNU6-437P-201ENST00000459408 95 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 RNA5SP272-201ENST00000516095 111 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 RNU6-56P-201ENST00000516986 93 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.5□□□□□ -2.01
NDC1Q9BTX1 MIR3945-201ENST00000581853 98 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 MIR3658-201ENST00000636291 56 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
NDC1Q9BTX1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR340-201ENST00000362125 95 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 RNA5SP68-201ENST00000363885 119 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms