Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC009831.4-201ENST00000620744 325 ntBASIC1.65□□□□□ -2.15
VGLL1Q99990 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.65□□□□□ -2.15
VGLL1Q99990 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.64□□□□□ -2.15
VGLL1Q99990 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VGLL1Q99990 Y_RNA.83-201ENST00000363005 113 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU6-1164P-201ENST00000364428 107 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU1-91P-201ENST00000364746 163 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 Y_RNA.287-201ENST00000364853 94 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 Y_RNA.304-201ENST00000365011 112 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU6-1240P-201ENST00000365155 104 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 SNORA72.4-201ENST00000384174 132 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 Y_RNA.456-201ENST00000384232 111 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU6-1248P-201ENST00000391096 64 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU6-710P-201ENST00000410424 105 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 OOSP1P1-201ENST00000423265 274 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 BTF3P11-201ENST00000426582 477 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.64□□□□□ -2.15
VGLL1Q99990 HSPE1P13-201ENST00000451143 297 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.64□□□□□ -2.15
VGLL1Q99990 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.64□□□□□ -2.15
VGLL1Q99990 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU6-1337P-201ENST00000516525 95 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU1-40P-201ENST00000516816 164 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 RNU1-97P-201ENST00000516872 164 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 SNORA81.3-201ENST00000517283 198 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 CYCSP26-201ENST00000534107 320 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 AC012640.5-201ENST00000623897 319 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 AC006435.5-201ENST00000624486 112 ntBASIC1.64□□□□□ -2.15
VGLL1Q99990 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.64□□□□□ -2.15
VGLL1Q99990 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VGLL1Q99990 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VGLL1Q99990 RNU6-47P-201ENST00000383866 107 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AL117342.1-201ENST00000404861 406 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNU6-855P-201ENST00000410395 104 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNA5SP338-201ENST00000410495 85 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AC008134.1-201ENST00000420943 193 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AC104332.1-201ENST00000440471 797 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RPS20P10-201ENST00000451209 253 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNU1-131P-201ENST00000458943 161 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNA5SP20-201ENST00000515976 84 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNY3P16-201ENST00000516338 101 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNA5SP281-201ENST00000516504 135 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 RNU7-128P-201ENST00000517247 62 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 SUMO2P18-201ENST00000518873 252 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.63□□□□□ -2.15
VGLL1Q99990 MIR4435-1-201ENST00000582552 80 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 MIR5002-201ENST00000584713 97 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AC004832.4-201ENST00000608952 331 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AC004792.1-201ENST00000614523 137 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 FTX_2.1-201ENST00000618816 94 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AL365265.1-201ENST00000621045 234 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 AC022513.1-201ENST00000624512 117 ntBASIC1.63□□□□□ -2.15
VGLL1Q99990 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.29-201ENST00000362570 113 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 RNU1-22P-201ENST00000363334 158 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.341-201ENST00000365341 102 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.510-201ENST00000384511 114 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 RNU6-918P-201ENST00000391219 106 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 PCNPP3-201ENST00000393579 471 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AL356379.1-201ENST00000414105 126 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.62□□□□□ -2.15
VGLL1Q99990 MTND5P15-201ENST00000434246 349 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 HMGN2P34-201ENST00000437647 269 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AL353689.1-201ENST00000438895 199 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.644-201ENST00000459006 113 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.62□□□□□ -2.15
VGLL1Q99990 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.674-201ENST00000516362 113 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 Y_RNA.679-201ENST00000516416 91 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.62□□□□□ -2.15
VGLL1Q99990 AC027419.1-201ENST00000522976 328 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VGLL1Q99990 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.62□□□□□ -2.15
VGLL1Q99990 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.62□□□□□ -2.15
VGLL1Q99990 MIR4308-201ENST00000580634 81 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 MIR3935-201ENST00000583472 104 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 AC013791.1-201ENST00000616619 62 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 MIR6132-201ENST00000622083 109 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 U6.108-201ENST00000637764 58 ntBASIC1.62□□□□□ -2.15
VGLL1Q99990 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VGLL1Q99990 AC134026.1-201ENST00000623249 2239 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AL356292.1-201ENST00000283110 373 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNA5SP160-201ENST00000364866 120 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
VGLL1Q99990 RN7SKP284-201ENST00000411002 343 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNA5SP508-201ENST00000411327 119 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 EDDM3CP-201ENST00000415977 425 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AC024067.1-201ENST00000426199 223 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.61□□□□□ -2.15
VGLL1Q99990 AL021397.1-201ENST00000451806 248 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RNU7-141P-201ENST00000459304 62 ntBASIC1.61□□□□□ -2.15
VGLL1Q99990 RPL36AP21-201ENST00000490372 323 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 233.1 ms