Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AP002004.2-201ENST00000531656 154 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 MIR5680-201ENST00000577577 84 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 AC098479.1-201ENST00000609225 154 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 AC068700.1-201ENST00000565862 3754 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 Y_RNA.121-201ENST00000363309 113 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 RNU6-1020P-201ENST00000363684 107 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 RPS27P1-201ENST00000450552 247 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 AC055731.1-201ENST00000474387 401 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 RN7SKP164-201ENST00000516138 266 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 MIR5094-201ENST00000578766 85 ntBASIC3.41□□□□□ -1.86
ARID3AQ99856 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.41□□□□□ -1.86
ARID3AQ99856 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ARID3AQ99856 Y_RNA.793-201ENST00000411222 111 ntBASIC3.4□□□□□ -1.87
ARID3AQ99856 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
ARID3AQ99856 RN7SL504P-201ENST00000494496 287 ntBASIC3.4□□□□□ -1.87
ARID3AQ99856 AC072026.1-201ENST00000605023 201 ntBASIC3.4□□□□□ -1.87
ARID3AQ99856 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ARID3AQ99856 AC008555.8-201ENST00000623602 2168 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ARID3AQ99856 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ARID3AQ99856 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ARID3AQ99856 MIR367-201ENST00000362299 68 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNA5SP432-201ENST00000362480 116 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6-950P-201ENST00000384651 107 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6-136P-201ENST00000384663 107 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6-918P-201ENST00000391219 106 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6-381P-201ENST00000391259 108 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.39□□□□□ -1.87
ARID3AQ99856 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.39□□□□□ -1.87
ARID3AQ99856 RN7SL863P-201ENST00000462370 296 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.39□□□□□ -1.87
ARID3AQ99856 RNVU1-2-201ENST00000516326 135 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AC021269.2-201ENST00000532318 330 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AC022217.4-201ENST00000604389 163 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AC004792.1-201ENST00000614523 137 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 AC012640.5-201ENST00000623897 319 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 MIR203B-201ENST00000636080 86 ntBASIC3.39□□□□□ -1.87
ARID3AQ99856 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
ARID3AQ99856 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ARID3AQ99856 RNU6-103P-201ENST00000363686 107 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 Y_RNA.203-201ENST00000364106 102 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 RNU6-969P-201ENST00000383900 105 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 RN7SKP101-201ENST00000411376 320 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.38□□□□□ -1.87
ARID3AQ99856 RNA5SP341-201ENST00000516261 117 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.38□□□□□ -1.87
ARID3AQ99856 MIR4325-201ENST00000583049 90 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 UBL5P2-201ENST00000583788 219 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 AL391903.3-201ENST00000612158 163 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 MIR7106-201ENST00000612419 65 ntBASIC3.38□□□□□ -1.87
ARID3AQ99856 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
ARID3AQ99856 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ARID3AQ99856 Y_RNA.308-201ENST00000365043 101 ntBASIC3.37□□□□□ -1.87
ARID3AQ99856 AL512604.1-201ENST00000404812 257 ntBASIC3.37□□□□□ -1.87
ARID3AQ99856 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.37□□□□□ -1.87
ARID3AQ99856 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.37□□□□□ -1.87
ARID3AQ99856 RNU7-28P-201ENST00000516759 62 ntBASIC3.37□□□□□ -1.87
ARID3AQ99856 MIR5694-201ENST00000581190 76 ntBASIC3.37□□□□□ -1.87
ARID3AQ99856 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.37□□□□□ -1.87
ARID3AQ99856 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ARID3AQ99856 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ARID3AQ99856 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
ARID3AQ99856 Y_RNA.7-201ENST00000362352 102 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 RNA5SP374-201ENST00000362939 125 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 RNA5SP126-201ENST00000365092 109 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 RNY3P5-201ENST00000384127 102 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 MIR520A-201ENST00000384862 85 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 MIR4308-201ENST00000580634 81 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 AL021707.8-201ENST00000609428 183 ntBASIC3.36□□□□□ -1.87
ARID3AQ99856 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ARID3AQ99856 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ARID3AQ99856 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ARID3AQ99856 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ARID3AQ99856 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 MIR616-201ENST00000385293 97 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 SNORD67-201ENST00000390833 111 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.35□□□□□ -1.87
ARID3AQ99856 AP002392.1-201ENST00000537692 208 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
ARID3AQ99856 AL929325.1-201ENST00000603096 117 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 FTX_2.1-201ENST00000618816 94 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 CTSLP2-204ENST00000629029 392 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 AL137790.1-201ENST00000634283 177 ntBASIC3.35□□□□□ -1.87
ARID3AQ99856 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ARID3AQ99856 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ARID3AQ99856 RNU6-112P-201ENST00000363599 104 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 MIR1278-201ENST00000408753 81 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 COX6CP10-201ENST00000416832 224 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 AC245047.3-201ENST00000429428 127 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 RNA5SP481-201ENST00000516814 122 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 MIR5004-201ENST00000579078 107 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.34□□□□□ -1.87
ARID3AQ99856 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.34□□□□□ -1.87
ARID3AQ99856 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ARID3AQ99856 RNU6-296P-201ENST00000384608 107 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms