Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MEIS3Q99687 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
MEIS3Q99687 CYCSP23-201ENST00000519781 313 ntBASIC2.19□□□□□ -2.06
MEIS3Q99687 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.19□□□□□ -2.06
MEIS3Q99687 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.19□□□□□ -2.06
MEIS3Q99687 MIR4765-201ENST00000585007 77 ntBASIC2.19□□□□□ -2.06
MEIS3Q99687 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.19□□□□□ -2.06
MEIS3Q99687 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.19□□□□□ -2.06
MEIS3Q99687 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MEIS3Q99687 RNU1-72P-201ENST00000362976 153 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 Y_RNA.124-201ENST00000363339 93 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 RNU5F-3P-201ENST00000363767 117 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 SNORA68.1-201ENST00000364537 132 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 RNU6-1310P-201ENST00000384153 107 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 MIR218-1-201ENST00000384999 110 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 MIR320B2-201ENST00000408479 138 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.18□□□□□ -2.06
MEIS3Q99687 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.18□□□□□ -2.06
MEIS3Q99687 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 RNU6-344P-201ENST00000516635 111 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 Y_RNA.703-201ENST00000516846 111 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 RNU6-1212P-201ENST00000517023 104 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 MIR3144-201ENST00000579460 79 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.18□□□□□ -2.06
MEIS3Q99687 AC006380.1-201ENST00000603598 186 ntBASIC2.18□□□□□ -2.06
MEIS3Q99687 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
MEIS3Q99687 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
MEIS3Q99687 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
MEIS3Q99687 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.17□□□□□ -2.06
MEIS3Q99687 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MEIS3Q99687 SNORD32B-201ENST00000364460 84 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 Y_RNA.240-201ENST00000364469 95 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 Y_RNA.262-201ENST00000364641 102 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 RNU6-1274P-201ENST00000384557 107 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MEIS3Q99687 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 AC016717.1-201ENST00000448918 286 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
MEIS3Q99687 SUMO2P18-201ENST00000518873 252 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 AC027419.1-201ENST00000522976 328 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MEIS3Q99687 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.17□□□□□ -2.06
MEIS3Q99687 U6.115-201ENST00000636045 103 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 U6.106-201ENST00000636360 105 ntBASIC2.17□□□□□ -2.06
MEIS3Q99687 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.17□□□□□ -2.06
MEIS3Q99687 RNU6-394P-201ENST00000410735 107 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AL606753.1-201ENST00000427435 87 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AL591806.2-201ENST00000433122 173 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
MEIS3Q99687 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
MEIS3Q99687 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 RNA5SP272-201ENST00000516095 111 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 RNU7-200P-201ENST00000516105 62 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 RNU6-965P-201ENST00000516721 96 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 AL670379.2-201ENST00000604983 252 ntBASIC2.16□□□□□ -2.06
MEIS3Q99687 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
MEIS3Q99687 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MEIS3Q99687 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MEIS3Q99687 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MEIS3Q99687 Y_RNA.412-201ENST00000384001 104 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 Y_RNA.571-201ENST00000384753 98 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 MIR504-201ENST00000385065 83 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 RNU7-14P-201ENST00000459331 62 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 RNU5F-4P-201ENST00000516581 114 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 RNU6-789P-201ENST00000517105 102 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 SCARNA11.3-201ENST00000517276 130 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.15□□□□□ -2.07
MEIS3Q99687 AC004832.4-201ENST00000608952 331 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 uc_338.14-201ENST00000613162 166 ntBASIC2.15□□□□□ -2.07
MEIS3Q99687 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MEIS3Q99687 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MEIS3Q99687 Y_RNA.182-201ENST00000363880 111 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 snoU2_19.4-201ENST00000364329 80 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 Y_RNA.243-201ENST00000364481 109 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 SNORD116-18-201ENST00000383961 92 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 RNU6-855P-201ENST00000410395 104 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
MEIS3Q99687 AL392103.1-201ENST00000447000 198 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.14□□□□□ -2.07
MEIS3Q99687 HMGN2P23-201ENST00000456759 269 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 RNU6-453P-201ENST00000516819 85 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.14□□□□□ -2.07
MEIS3Q99687 MIR5692C2-201ENST00000577959 77 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 MIR7515-201ENST00000637837 67 ntBASIC2.14□□□□□ -2.07
MEIS3Q99687 AC010329.5-201ENST00000623497 2174 ntBASIC2.13□□□□□ -2.07
MEIS3Q99687 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MEIS3Q99687 Y_RNA.24-201ENST00000362508 103 ntBASIC2.13□□□□□ -2.07
MEIS3Q99687 Y_RNA.238-201ENST00000364441 102 ntBASIC2.13□□□□□ -2.07
MEIS3Q99687 Y_RNA.293-201ENST00000364908 93 ntBASIC2.13□□□□□ -2.07
MEIS3Q99687 AL355796.1-201ENST00000406706 323 ntBASIC2.13□□□□□ -2.07
MEIS3Q99687 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms