Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR518C-201ENST00000384822 101 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR196B-201ENST00000384852 84 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU4-43P-201ENST00000410628 137 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 AL121890.1-201ENST00000435457 205 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 AL109933.2-201ENST00000452651 260 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU7-23P-201ENST00000459465 62 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR5582-201ENST00000579697 68 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR378D2-201ENST00000580636 98 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 AL049861.1-201ENST00000603130 150 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 AC008555.8-201ENST00000623602 2168 ntBASIC2.8□□□□□ -1.96
CDK5RAP1Q96SZ6 U3.8-201ENST00000363675 217 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-978P-201ENST00000364371 103 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 SNORA20B-201ENST00000384220 132 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 AL135786.1-201ENST00000415892 214 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 AL158147.1-201ENST00000443970 75 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 SNORA59A-201ENST00000459326 152 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 AC027176.1-201ENST00000560204 514 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 RPL30P11-203ENST00000598995 310 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR6852-201ENST00000621699 66 ntBASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.79□□□□□ -1.96
CDK5RAP1Q96SZ6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-597P-201ENST00000365620 102 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-144P-201ENST00000383951 107 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR548A1-201ENST00000385041 97 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 AC092427.1-202ENST00000430569 476 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 MTCO1P44-201ENST00000441935 243 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 RPL23AP7-203ENST00000449021 469 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 snoU13.14-201ENST00000459372 104 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 HMGN2P9-201ENST00000476875 229 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 RPL23AP54-201ENST00000495129 419 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 MIR3121-201ENST00000579680 77 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 POLR3GP1-201ENST00000594073 261 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.78□□□□□ -1.96
CDK5RAP1Q96SZ6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.97
CDK5RAP1Q96SZ6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORD114-19-201ENST00000363072 75 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-309P-201ENST00000364573 106 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-484P-201ENST00000384016 107 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORD116-21-201ENST00000384507 92 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR1185-2-201ENST00000408687 86 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 RPS3P1-201ENST00000456781 192 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AC080013.2-201ENST00000460866 323 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AP003357.1-201ENST00000604497 148 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 uc_338.28-201ENST00000612082 187 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
CDK5RAP1Q96SZ6 AC010889.1-201ENST00000566193 2666 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORD58C-201ENST00000365223 64 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-748P-201ENST00000384648 107 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR147B-201ENST00000390185 80 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 AC016717.1-201ENST00000448918 286 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORA70.12-201ENST00000516084 153 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.757-201ENST00000578934 114 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR5688-201ENST00000580619 83 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR4672-201ENST00000583126 81 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR4635-201ENST00000583759 79 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 AL670379.3-201ENST00000605040 251 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 UCA1.1-201ENST00000620952 75 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 snoZ196.1-201ENST00000625269 89 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 AC069528.2-201ENST00000624849 1991 ntBASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-655P-201ENST00000362858 107 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU4-41P-201ENST00000364426 143 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-136P-201ENST00000384663 107 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms