Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 AC004223.1-201ENST00000479840 271 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 HMGB3P17-201ENST00000504195 649 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 MRPS35P2-201ENST00000508242 191 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 AC010598.1-201ENST00000510378 103 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
SIN3AQ96ST3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.97□□□□□ -2.09
SIN3AQ96ST3 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.97□□□□□ -2.09
SIN3AQ96ST3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 AC008555.8-201ENST00000623602 2168 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.145-201ENST00000363527 102 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 RNU6-806P-201ENST00000365147 105 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 MIR1253-201ENST00000408273 105 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.96□□□□□ -2.1
SIN3AQ96ST3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.96□□□□□ -2.1
SIN3AQ96ST3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 AC025465.3-201ENST00000510570 311 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 AC027419.1-201ENST00000522976 328 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
SIN3AQ96ST3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SIN3AQ96ST3 MIR378A-201ENST00000362177 66 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNU1-96P-201ENST00000364163 162 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 SNORD115-46-201ENST00000390982 71 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNA5SP467-201ENST00000391274 118 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNU4-30P-201ENST00000410245 143 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 CST2P1-201ENST00000425770 87 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNU1-123P-201ENST00000458950 160 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 MTATP8P1-201ENST00000467115 207 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNU6-155P-201ENST00000516347 100 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 RNU7-128P-201ENST00000517247 62 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.95□□□□□ -2.1
SIN3AQ96ST3 AC084364.2-201ENST00000546924 395 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 SUB1P4-201ENST00000566062 339 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 AC008737.2-201ENST00000599446 118 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 AL512598.1-201ENST00000610158 273 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 MIR376A1-201ENST00000616574 68 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 AC006435.5-201ENST00000624486 112 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 U6.108-201ENST00000637764 58 ntBASIC1.95□□□□□ -2.1
SIN3AQ96ST3 SNORA27.1-201ENST00000362604 124 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 SNORD81.1-201ENST00000363064 77 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 RNU6-770P-201ENST00000363929 105 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 RNU6-102P-201ENST00000384485 104 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AL031003.1-201ENST00000404229 172 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 MIR548F4-201ENST00000408515 105 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.94□□□□□ -2.1
SIN3AQ96ST3 MTND2P23-201ENST00000422990 651 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC005042.3-201ENST00000453230 174 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 LINC01399-202ENST00000458450 244 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SIN3AQ96ST3 RNU7-110P-201ENST00000516891 62 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC023157.2-201ENST00000540596 141 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
SIN3AQ96ST3 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 AC011373.1-201ENST00000607270 237 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 MIR873-201ENST00000401120 77 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AL390729.2-201ENST00000416137 156 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AL118496.2-201ENST00000448300 230 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 MTND5P22-201ENST00000458380 195 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AC098869.1-201ENST00000481627 292 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 RNU6-436P-201ENST00000516171 114 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 RNU6-327P-201ENST00000516270 127 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 RNY3P15-201ENST00000516297 97 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 SNORA40.15-201ENST00000516884 107 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AL137100.2-201ENST00000555786 315 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AC006380.1-201ENST00000603598 186 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 AC136443.5-201ENST00000603741 370 ntBASIC1.93□□□□□ -2.1
SIN3AQ96ST3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 SNORD113-8-201ENST00000363497 74 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 AL512604.1-201ENST00000404812 257 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 RPL21P38-201ENST00000418090 167 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
SIN3AQ96ST3 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 SUMO1P2-201ENST00000452524 304 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms