Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR3683-201ENST00000580847 82 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 MIR548BB-201ENST00000626714 66 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 AP003122.5-201ENST00000527668 3766 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD115-19-201ENST00000363098 82 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD115-18-201ENST00000363293 82 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD115-17-201ENST00000364612 82 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 MIR1294-201ENST00000408503 142 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-887P-201ENST00000410660 100 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-733P-201ENST00000410759 104 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 AC016909.1-201ENST00000415916 166 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 AL353813.1-201ENST00000440700 253 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 PHBP14-201ENST00000512887 367 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.705-201ENST00000516862 110 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 YPEL5P3-201ENST00000547227 352 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 MIR4765-201ENST00000585007 77 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 AC073413.2-201ENST00000604332 360 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 MIR1255B1-201ENST00000636325 63 ntBASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTNAP3BQ96NU0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 MIR423-201ENST00000362201 94 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-661P-201ENST00000362409 107 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.95-201ENST00000363079 95 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RNU1-96P-201ENST00000364163 162 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 SNORA18-201ENST00000384416 132 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RNY1P4-201ENST00000384595 115 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 MIR605-201ENST00000385078 83 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 HMGN2P8-201ENST00000391458 268 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RPS12P18-201ENST00000442381 270 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 RNU1-131P-201ENST00000458943 161 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.773-201ENST00000607168 90 ntBASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3BQ96NU0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-509P-201ENST00000363519 107 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.155-201ENST00000363632 101 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD35B-201ENST00000363660 87 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-590P-201ENST00000365039 107 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 MIR1179-201ENST00000408703 91 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 MIR1911-201ENST00000410783 80 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 RNU7-14P-201ENST00000459331 62 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 UBL5P3-201ENST00000475112 231 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 HMGN1P7-201ENST00000491722 313 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 AC025554.1-201ENST00000505641 188 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 AC009487.4-201ENST00000624969 3585 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 MAPK10-373ENST00000641983 6772 ntBASIC3.62□□□□□ -1.83
CNTNAP3BQ96NU0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 SNORD45B-201ENST00000364617 72 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-409P-201ENST00000384114 104 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 CYCSP4-201ENST00000429682 331 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3BQ96NU0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.191-201ENST00000363972 113 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 RNU4-67P-201ENST00000364569 141 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.377-201ENST00000365644 108 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.467-201ENST00000384297 102 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms