Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.39□□□□□ -2.47
CCDC42Q96M95 AC008536.2-201ENST00000607284 349 ntBASIC-0.39□□□□□ -2.47
CCDC42Q96M95 AL357078.3-201ENST00000607528 618 ntBASIC-0.39□□□□□ -2.47
CCDC42Q96M95 SNORD45.3-201ENST00000363836 72 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 RNY3P9-201ENST00000384727 106 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 BX295541.1-201ENST00000417774 250 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC42Q96M95 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC42Q96M95 MTCO2P16-201ENST00000436962 677 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC42Q96M95 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC42Q96M95 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC42Q96M95 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 RNA5SP268-201ENST00000516828 124 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 MIR5692C1-201ENST00000585309 91 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 AL133215.3-201ENST00000609801 448 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 MIR1295B-201ENST00000636144 60 ntBASIC-0.4□□□□□ -2.47
CCDC42Q96M95 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 U8.7-201ENST00000364940 136 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RNU6-214P-201ENST00000384130 107 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RNU6-514P-201ENST00000384208 107 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 MIR145-201ENST00000384967 88 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AL593851.1-201ENST00000426171 157 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC015818.7-201ENST00000428754 109 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.41□□□□□ -2.48
CCDC42Q96M95 MTND4LP16-201ENST00000440828 295 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC087499.7-201ENST00000441958 109 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC073415.1-201ENST00000449240 153 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 TPTE2P5-203ENST00000458118 728 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RPL23AP54-201ENST00000495129 419 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RNU6-311P-201ENST00000516224 102 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RN7SKP287-201ENST00000516546 266 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC090897.1-201ENST00000580909 226 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC100830.2-201ENST00000581636 240 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 AC020891.4-201ENST00000605745 93 ntBASIC-0.41□□□□□ -2.48
CCDC42Q96M95 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.41□□□□□ -2.48
CCDC42Q96M95 RNU6-996P-201ENST00000365438 107 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 RNU6-136P-201ENST00000384663 107 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 MIR873-201ENST00000401120 77 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 AL606923.1-201ENST00000406616 190 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 RNU2-54P-201ENST00000410299 190 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 RPL30P16-201ENST00000419341 429 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 SNORD45.4-201ENST00000516629 73 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC42Q96M95 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC42Q96M95 MIR548AR-201ENST00000582191 57 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 MIR4305-201ENST00000583252 102 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 MIR4743-201ENST00000584576 69 ntBASIC-0.42□□□□□ -2.48
CCDC42Q96M95 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 MIR613-201ENST00000385248 95 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 PCNPP3-201ENST00000393579 471 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 MIR938-201ENST00000401216 83 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 MTATP6P18-201ENST00000417994 673 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 AL353572.1-201ENST00000442490 417 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 HMGN2P32-201ENST00000444648 269 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.43□□□□□ -2.48
CCDC42Q96M95 RNU7-63P-201ENST00000459054 62 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 SNORD42A-201ENST00000459584 64 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 AP000753.3-201ENST00000604083 169 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.43□□□□□ -2.48
CCDC42Q96M95 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 RNU6-302P-201ENST00000365249 107 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 RNU6-297P-201ENST00000384636 107 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 SNORD28B-201ENST00000390993 75 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC42Q96M95 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC116353.2-201ENST00000505332 712 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC046134.1-201ENST00000514454 666 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC092747.3-201ENST00000603769 301 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 AC005609.4-201ENST00000625071 447 ntBASIC-0.44□□□□□ -2.48
CCDC42Q96M95 MIR522-201ENST00000385071 87 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RNU6-205P-201ENST00000390858 107 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RNU6-127P-201ENST00000390897 107 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 MTCO2P8-201ENST00000412213 658 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 AL354751.2-201ENST00000415471 210 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RPL30P10-201ENST00000488148 337 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RPL17P19-201ENST00000489069 552 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RNA5SP330-201ENST00000517096 96 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 AL121757.2-201ENST00000611223 313 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 MIR6755-201ENST00000619993 66 ntBASIC-0.45□□□□□ -2.48
CCDC42Q96M95 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 SNORA36.1-201ENST00000363424 132 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 RNU6-248P-201ENST00000410720 107 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 SUMO1P2-201ENST00000452524 304 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 RNU6-63P-201ENST00000516690 95 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 AC005730.3-201ENST00000583067 366 ntBASIC-0.46□□□□□ -2.48
CCDC42Q96M95 MIR4264-201ENST00000583520 66 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms