Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-855P-201ENST00000410395 104 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 Y_RNA.793-201ENST00000411222 111 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 PIGPP3-201ENST00000425307 415 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 AC009238.1-201ENST00000442165 424 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 AC009237.6-201ENST00000446969 424 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 RNU6-856P-201ENST00000516959 98 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 AC087441.2-201ENST00000529141 262 ntBASIC2.75□□□□□ -1.97
RTF1Q92541 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.75□□□□□ -1.97
RTF1Q92541 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RTF1Q92541 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTF1Q92541 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
RTF1Q92541 Y_RNA.262-201ENST00000364641 102 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 SNORA40.19-201ENST00000390846 128 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 RNU6-763P-201ENST00000390865 106 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 AC016909.1-201ENST00000415916 166 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.74□□□□□ -1.97
RTF1Q92541 AL445646.1-201ENST00000431784 216 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 RPS26P55-201ENST00000471178 356 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.74□□□□□ -1.97
RTF1Q92541 HMGB3P3-201ENST00000510526 400 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
RTF1Q92541 FTX_2.1-201ENST00000618816 94 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTF1Q92541 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTF1Q92541 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTF1Q92541 AC092881.1-201ENST00000638218 2733 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 AC005336.3-201ENST00000623833 2679 ntBASIC2.74□□□□□ -1.97
RTF1Q92541 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
RTF1Q92541 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.73□□□□□ -1.97
RTF1Q92541 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTF1Q92541 MIR340-201ENST00000362125 95 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 Y_RNA.124-201ENST00000363339 93 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 Y_RNA.287-201ENST00000364853 94 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 SNORA72.4-201ENST00000384174 132 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 Y_RNA.555-201ENST00000384673 110 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 AC010154.1-201ENST00000425857 269 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 HMGN2P3-201ENST00000433603 273 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 HMGN2P5-201ENST00000436882 273 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 PRELID3BP1-201ENST00000457142 540 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.73□□□□□ -1.97
RTF1Q92541 RNA5SP82-201ENST00000516707 92 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.73□□□□□ -1.97
RTF1Q92541 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 AC024405.2-202ENST00000532731 184 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RTF1Q92541 MIR7843-201ENST00000622274 79 ntBASIC2.73□□□□□ -1.97
RTF1Q92541 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RTF1Q92541 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RTF1Q92541 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RTF1Q92541 Y_RNA.99-201ENST00000363138 105 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 RNU6-209P-201ENST00000384118 107 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 SNORA26.5-201ENST00000391215 123 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 MIR1289-2-201ENST00000408360 111 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 RNU7-120P-201ENST00000459334 63 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 RNA5SP20-201ENST00000515976 84 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 MIR5692C2-201ENST00000577959 77 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 AC013791.1-201ENST00000616619 62 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 AL365265.1-201ENST00000621045 234 ntBASIC2.72□□□□□ -1.97
RTF1Q92541 CENPCP1-201ENST00000533085 2578 ntBASIC2.71□□□□□ -1.98
RTF1Q92541 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RTF1Q92541 RNU6-1020P-201ENST00000363684 107 ntBASIC2.71□□□□□ -1.98
RTF1Q92541 EDDM3CP-201ENST00000415977 425 ntBASIC2.71□□□□□ -1.98
RTF1Q92541 RPL36AP21-201ENST00000490372 323 ntBASIC2.71□□□□□ -1.98
RTF1Q92541 AP002392.1-201ENST00000537692 208 ntBASIC2.71□□□□□ -1.98
RTF1Q92541 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.71□□□□□ -1.98
RTF1Q92541 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RTF1Q92541 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-653P-201ENST00000363074 106 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-899P-201ENST00000363947 107 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-407P-201ENST00000365280 104 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 MIR144-201ENST00000384886 86 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 AL355497.1-201ENST00000406262 551 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RPS20P10-201ENST00000451209 253 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU1-131P-201ENST00000458943 161 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U8.19-201ENST00000459095 133 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.7□□□□□ -1.98
RTF1Q92541 RNU6-1337P-201ENST00000516525 95 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 SUMO2P18-201ENST00000518873 252 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTF1Q92541 U2.15-201ENST00000611544 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.16-201ENST00000613119 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.12-201ENST00000613778 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.20-201ENST00000613956 192 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.9-201ENST00000615427 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.11-201ENST00000616345 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.2-201ENST00000616535 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.3-201ENST00000617785 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.19-201ENST00000618602 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 RNU2-1-201ENST00000618664 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.5-201ENST00000619465 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 U2.10-201ENST00000620268 191 ntBASIC2.7□□□□□ -1.98
RTF1Q92541 Y_RNA.435-201ENST00000384095 112 ntBASIC2.69□□□□□ -1.98
RTF1Q92541 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms