Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-597P-201ENST00000365620 102 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 SNORA67.2-201ENST00000384300 149 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 AL139095.1-201ENST00000404326 391 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNA5SP201-201ENST00000410316 124 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-855P-201ENST00000410395 104 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-383P-201ENST00000410864 94 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 AC234781.5-201ENST00000508429 271 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-107P-201ENST00000516643 102 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.694-201ENST00000516677 117 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 AC006199.1-201ENST00000548728 219 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 SNRPGP20-201ENST00000604477 205 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 U6.115-201ENST00000636045 103 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 U6.95-201ENST00000636931 70 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 AC092427.1-202ENST00000430569 476 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 AL158147.1-201ENST00000443970 75 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 AIG1P1-201ENST00000503376 148 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-344P-201ENST00000516635 111 ntBASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SH3RF3Q8TEJ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SH3RF3Q8TEJ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SH3RF3Q8TEJ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
SH3RF3Q8TEJ3 AC010889.1-201ENST00000566193 2666 ntBASIC2.9□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.35-201ENST00000362601 101 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 SNORA20B-201ENST00000384220 132 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 CYCSP48-201ENST00000417124 323 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 SNRPGP8-201ENST00000454064 226 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 AC021739.1-201ENST00000559631 174 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 MIR4724-201ENST00000579485 89 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 MIR5092-201ENST00000583139 88 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 AC103810.6-201ENST00000606708 136 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 AC068205.3-201ENST00000636385 468 ntBASIC2.9□□□□□ -1.95
SH3RF3Q8TEJ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 ZNF658B-202ENST00000615961 3375 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 SNORD45.3-201ENST00000363836 72 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-144P-201ENST00000383951 107 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 Z98742.3-201ENST00000418637 326 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 MTCO1P44-201ENST00000441935 243 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 RPL39P40-201ENST00000445481 146 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 AC104389.3-201ENST00000445629 235 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 ACA59.2-201ENST00000517061 156 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 MIR3136-201ENST00000583498 78 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 SNORD11B-201ENST00000607707 90 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 AC068647.2-201ENST00000637380 353 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 AC007336.1-201ENST00000576365 3828 ntBASIC2.89□□□□□ -1.95
SH3RF3Q8TEJ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 U8.1-201ENST00000362843 134 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 RNY3P5-201ENST00000384127 102 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 SNORA70B-201ENST00000384210 135 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 MIR1302-4-201ENST00000408701 150 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AC004386.2-201ENST00000441858 148 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AC026436.1-201ENST00000510537 270 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 MIR3923-201ENST00000579521 83 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AL031274.2-201ENST00000599419 203 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AL670379.3-201ENST00000605040 251 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AC025754.2-201ENST00000606491 432 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SH3RF3Q8TEJ3 AC002543.1-201ENST00000299783 1954 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-529P-201ENST00000363383 104 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-978P-201ENST00000364371 103 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.495-201ENST00000384435 112 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 MIR320B2-201ENST00000408479 138 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 TOMM22P2-201ENST00000430735 237 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.757-201ENST00000578934 114 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AL034555.1-201ENST00000604816 211 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms