Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC074133.1-201ENST00000515696 183 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 RNU6-120P-201ENST00000516077 103 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 AC091178.2-201ENST00000584401 117 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 AL162424.1-201ENST00000602325 221 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 AC080078.2-201ENST00000603766 501 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 AC092794.2-201ENST00000620933 563 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 U6.115-201ENST00000636045 103 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
LINC01560Q8TB33 CASC19-280ENST00000642102 1351 ntBASIC0.83□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.124-201ENST00000363339 93 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.279-201ENST00000364763 95 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.82□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.498-201ENST00000384460 102 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 MTCYBP4-201ENST00000401524 249 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
LINC01560Q8TB33 PDCL2P1-201ENST00000419302 352 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 MRPL35P3-201ENST00000421557 364 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RAB28P5-201ENST00000427490 651 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
LINC01560Q8TB33 AL137792.2-201ENST00000443484 235 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 UBE2V1P7-201ENST00000446395 340 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RNU6-625P-201ENST00000459412 107 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RPL17P19-201ENST00000489069 552 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 OR9P1P-201ENST00000496431 281 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 SNORA40.9-201ENST00000515895 93 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 RNU6-922P-201ENST00000516753 99 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 MTND4LP26-201ENST00000518144 282 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 AC005828.6-201ENST00000606610 232 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 PISRT1.1-201ENST00000616930 107 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 AL669831.3-213ENST00000636676 183 ntBASIC0.82□□□□□ -2.28
LINC01560Q8TB33 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 SNORA1B-201ENST00000362535 133 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RNU6-845P-201ENST00000362578 103 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RNU6-1301P-201ENST00000362724 104 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.160-201ENST00000363677 92 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.265-201ENST00000364677 108 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.267-201ENST00000364679 109 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RNU6-117P-201ENST00000365415 107 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RNU6-424P-201ENST00000384367 105 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 U8.16-201ENST00000391279 133 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.691-201ENST00000516611 103 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 RPL21P9-201ENST00000556149 474 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 MIR5000-201ENST00000577717 103 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 MIR3684-201ENST00000579779 74 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AC005899.2-201ENST00000584353 90 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AC099654.5-201ENST00000636479 350 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 MIR3674-201ENST00000636576 68 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 AC005592.1-201ENST00000566527 1640 ntBASIC0.81□□□□□ -2.28
LINC01560Q8TB33 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.248-201ENST00000364501 109 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 SNORA25.8-201ENST00000364831 128 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 RNU6-342P-201ENST00000384521 104 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 RNU6-376P-201ENST00000384731 106 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 MIR618-201ENST00000385287 98 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 SNORD41-201ENST00000386967 70 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 SNORD12B-201ENST00000410433 91 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 RNU6-1291P-201ENST00000516591 104 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 RNU2-56P-201ENST00000516826 190 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 RNU6-341P-201ENST00000516973 96 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01560Q8TB33 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.8□□□□□ -2.28
LINC01560Q8TB33 AL513534.2-201ENST00000603836 250 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 SNORA28-201ENST00000606769 126 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 AC098679.4-201ENST00000624241 654 ntBASIC0.8□□□□□ -2.28
LINC01560Q8TB33 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LINC01560Q8TB33 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNU6-199P-201ENST00000362954 107 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.166-201ENST00000363730 102 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 MIR653-201ENST00000385279 96 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 MT-TL1-201ENST00000386347 75 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 MIR873-201ENST00000401120 77 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNA5SP475-201ENST00000410568 110 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.619-201ENST00000410951 90 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 Y_RNA.646-201ENST00000410980 101 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNU5A-5P-201ENST00000411054 116 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RPS29P28-201ENST00000446439 141 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 AC093850.1-201ENST00000454121 251 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 MIR2053-201ENST00000459295 91 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNU6-917P-201ENST00000516294 104 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNU6-63P-201ENST00000516690 95 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 RNA5SP404-201ENST00000517118 132 ntBASIC0.79□□□□□ -2.28
LINC01560Q8TB33 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.79□□□□□ -2.28
LINC01560Q8TB33 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
LINC01560Q8TB33 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms