Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SNORA25.15-201ENST00000516487 89 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RNU6-63P-201ENST00000516690 95 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RNU4-77P-201ENST00000516692 156 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 AP002004.2-201ENST00000531656 154 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU6-626P-201ENST00000363354 107 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU1-115P-201ENST00000365329 160 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 SNORA70B-201ENST00000384210 135 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU6-424P-201ENST00000384367 105 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU6-505P-201ENST00000384427 107 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 MIR520G-201ENST00000385064 90 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 MT-TD-201ENST00000387419 68 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RNU2-56P-201ENST00000516826 190 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 RAB11AP2-201ENST00000545905 639 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 AL512310.8-201ENST00000550183 120 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 MIR5188-201ENST00000583467 113 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 AL117336.2-201ENST00000602435 335 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 AC092447.9-201ENST00000603395 144 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 AC006380.1-201ENST00000603598 186 ntBASIC1.25□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 RNU2-61P-201ENST00000411069 191 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 AL135790.2-201ENST00000437701 267 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 SNORA70.12-201ENST00000516084 153 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 AL358944.1-201ENST00000528537 144 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 AC010205.1-201ENST00000616668 449 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 SNORD3E-202ENST00000627253 216 ntBASIC1.24□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 CALM2P4-201ENST00000430810 426 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 RNU6-155P-201ENST00000516347 100 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 SNORA40.14-201ENST00000516543 86 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 RNA5SP168-201ENST00000516642 112 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 MIR4423-201ENST00000580922 80 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 AC022441.3-201ENST00000605737 136 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 SNORD58B-201ENST00000607313 66 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 AL138825.1-201ENST00000618587 192 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 AL606534.2-204ENST00000635008 178 ntBASIC1.23□□□□□ -2.21
CCDC197Q8NCU1 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 MIR23A-201ENST00000385245 73 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 RNA5SP482-201ENST00000391269 118 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 U8.16-201ENST00000391279 133 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 RNA5SP511-201ENST00000410487 115 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 AL354751.2-201ENST00000415471 210 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 AL162725.1-201ENST00000435405 301 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 AL133255.1-201ENST00000606374 441 ntBASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CCDC197Q8NCU1 MIRLET7C-201ENST00000362160 84 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 SNORD116-13-201ENST00000384408 92 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 RNU6-136P-201ENST00000384663 107 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 MTND4LP11-201ENST00000422184 280 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 AL163540.1-201ENST00000485382 386 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 RNU6-436P-201ENST00000516171 114 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 RN7SKP295-201ENST00000517264 153 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 AL080274.1-201ENST00000605565 220 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
CCDC197Q8NCU1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 RNU4-76P-201ENST00000364509 141 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 OOSP1P1-201ENST00000423265 274 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 AL160004.2-201ENST00000432935 350 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 RPEP5-201ENST00000441137 268 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 RPS4XP11-201ENST00000446897 772 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 MIR4513-201ENST00000581077 86 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 MIR6845-201ENST00000613182 61 ntBASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC197Q8NCU1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC197Q8NCU1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC197Q8NCU1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 308.8 ms