Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 AC110588.1-201ENST00000559699 137 ntBASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 MIR4438-201ENST00000585271 93 ntBASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 U6.73-201ENST00000619194 103 ntBASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 AC010615.1-201ENST00000594254 1764 ntBASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN4BQ8IWT1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 Y_RNA.376-201ENST00000365638 108 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 RNU6-505P-201ENST00000384427 107 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 Y_RNA.541-201ENST00000384640 113 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 Y_RNA.569-201ENST00000384749 103 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 SNORA53-201ENST00000391141 249 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 RNU6-710P-201ENST00000410424 105 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 RNU2-61P-201ENST00000411069 191 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 TRBVB-201ENST00000477100 408 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 DEFB117-201ENST00000602356 141 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 AC037487.3-201ENST00000606668 112 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 AL359075.3-201ENST00000613288 217 ntBASIC2.04□□□□□ -2.08
SCN4BQ8IWT1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 RNU6-196P-201ENST00000384315 107 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 SNORA8-201ENST00000384574 139 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 MIR568-201ENST00000385036 95 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 RNA5SP323-201ENST00000391094 133 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 RNA5SP467-201ENST00000391274 118 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 RNU6-1203P-201ENST00000410703 110 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 MTND4LP30-201ENST00000454092 297 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 HMGN1P10-201ENST00000474557 553 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AC010409.1-201ENST00000487382 476 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AC108210.2-201ENST00000503681 201 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AC097462.1-201ENST00000514125 324 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AC024995.1-201ENST00000523014 93 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 DEFB122-202ENST00000569013 197 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 MIR5094-201ENST00000578766 85 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
SCN4BQ8IWT1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SCN4BQ8IWT1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 RNU1-22P-201ENST00000363334 158 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.556-201ENST00000384677 113 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 HSPE1P13-201ENST00000451143 297 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 RNU1-142P-201ENST00000516682 145 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 RNU2-31P-201ENST00000516954 155 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 AL161670.1-201ENST00000554348 137 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 AC015712.3-201ENST00000559380 164 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 MIR3145-201ENST00000580727 82 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN4BQ8IWT1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.144-201ENST00000363521 113 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 SNORA33-201ENST00000363664 130 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU6-326P-201ENST00000365480 107 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU6-1248P-201ENST00000391096 64 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU6-1338P-201ENST00000516328 91 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 RNU7-172P-201ENST00000517125 64 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SCN4BQ8IWT1 SNORA25.1-201ENST00000362326 128 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.16-201ENST00000362421 102 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU4-80P-201ENST00000363200 141 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU6-1019P-201ENST00000364424 107 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.396-201ENST00000383949 103 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU6-514P-201ENST00000384208 107 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU6-472P-201ENST00000384299 107 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.483-201ENST00000384380 101 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 MT-TW-201ENST00000387382 68 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU11-5P-201ENST00000391216 129 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 EBAG9P1-201ENST00000418955 543 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 RNA5SP182-201ENST00000516064 82 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms