Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VRK3Q8IV63 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VRK3Q8IV63 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VRK3Q8IV63 AL356292.1-201ENST00000283110 373 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU1-105P-201ENST00000363470 161 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU6-1082P-201ENST00000364574 107 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 SNORD31B-201ENST00000364977 69 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU6-117P-201ENST00000365415 107 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 SNORD21-201ENST00000383953 95 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU6-1056P-201ENST00000383996 107 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC010154.1-201ENST00000425857 269 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 AL031183.1-201ENST00000457667 207 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU6-437P-201ENST00000459408 95 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 ATP5EP1-201ENST00000510257 156 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNA5SP112-201ENST00000515937 99 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RN7SKP179-201ENST00000516126 217 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RNU2-56P-201ENST00000516826 190 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 MIR4765-201ENST00000585007 77 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 MIR4753-201ENST00000585119 83 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC120024.3-201ENST00000603167 156 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 AC006435.5-201ENST00000624486 112 ntBASIC2.51□□□□□ -2.01
VRK3Q8IV63 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VRK3Q8IV63 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VRK3Q8IV63 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU6-944P-201ENST00000364023 107 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU6-978P-201ENST00000364371 103 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU6-234P-201ENST00000365229 104 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU6-1274P-201ENST00000384557 107 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC009414.1-201ENST00000427200 443 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC016925.1-201ENST00000458303 298 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU7-107P-201ENST00000459121 61 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNA5SP20-201ENST00000515976 84 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 MIR449C-201ENST00000516047 92 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 RNU6-948P-201ENST00000516374 107 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC025647.1-201ENST00000517879 253 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VRK3Q8IV63 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VRK3Q8IV63 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK3Q8IV63 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK3Q8IV63 Y_RNA.280-201ENST00000364765 112 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 RNU6-484P-201ENST00000384016 107 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 MIR196B-201ENST00000384852 84 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VRK3Q8IV63 RNA5SP511-201ENST00000410487 115 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 Y_RNA.622-201ENST00000411091 108 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 Z82209.1-201ENST00000422141 2135 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 AC245047.4-201ENST00000433189 144 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.49□□□□□ -2.01
VRK3Q8IV63 RNA5SP320-201ENST00000516263 124 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 RNU6-197P-201ENST00000516680 100 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 AC090049.2-201ENST00000550377 109 ntBASIC2.49□□□□□ -2.01
VRK3Q8IV63 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.49□□□□□ -2.01
VRK3Q8IV63 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.49□□□□□ -2.01
VRK3Q8IV63 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
VRK3Q8IV63 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VRK3Q8IV63 RNU6-486P-201ENST00000363116 107 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 RNU6-915P-201ENST00000364943 103 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 CD24P4-201ENST00000382840 243 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 RNU6-1083P-201ENST00000384022 107 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 RNU6-429P-201ENST00000384582 108 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 Y_RNA.587-201ENST00000391210 103 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 AL512604.1-201ENST00000404812 257 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 RNU6-1064P-201ENST00000410626 104 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MICF-203ENST00000432679 129 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 AC016717.1-201ENST00000448918 286 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.48□□□□□ -2.01
VRK3Q8IV63 RPL23AP54-201ENST00000495129 419 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 RPL23AP94-201ENST00000512518 302 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.48□□□□□ -2.01
VRK3Q8IV63 AC015720.1-201ENST00000565251 277 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR4298-201ENST00000584380 73 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
VRK3Q8IV63 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
VRK3Q8IV63 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VRK3Q8IV63 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.48□□□□□ -2.01
VRK3Q8IV63 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VRK3Q8IV63 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms