Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 Y_RNA.280-201ENST00000364765 112 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 MIR634-201ENST00000385208 97 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 SNORA40.5-201ENST00000391061 128 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 RNY4P18-201ENST00000391107 89 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC006539.3-201ENST00000454258 129 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 MRPS17P9-201ENST00000511924 393 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC008885.1-201ENST00000514930 301 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC007751.1-201ENST00000529260 376 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 uc_338.25-201ENST00000613756 156 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC006386.2-201ENST00000624491 75 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC012005.1-201ENST00000624575 75 ntBASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM50Q86XT4 AL136360.1-201ENST00000503377 1900 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 Y_RNA.52-201ENST00000362760 96 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 Y_RNA.66-201ENST00000362862 102 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 RNU6-309P-201ENST00000364573 106 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 RNA5SP125-201ENST00000364843 120 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 SNORA7.4-201ENST00000384249 137 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 SNORA54-201ENST00000384281 123 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 AL603914.1-201ENST00000401964 204 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 RNA5SP127-201ENST00000411051 133 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 SNORA59A-201ENST00000459326 152 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 PDCD5P2-201ENST00000507570 312 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 AC091178.2-201ENST00000584401 117 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 MIR6079-201ENST00000635807 62 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 MIR338-201ENST00000636369 67 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 U6.95-201ENST00000636931 70 ntBASIC3.55□□□□□ -1.84
TRIM50Q86XT4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM50Q86XT4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 RNU11-5P-201ENST00000391216 129 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 Y_RNA.630-201ENST00000411370 108 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 AC092185.1-201ENST00000491371 97 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 AC096725.1-201ENST00000514266 313 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 MIR3129-201ENST00000581095 76 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 AC108081.1-201ENST00000604358 221 ntBASIC3.54□□□□□ -1.84
TRIM50Q86XT4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM50Q86XT4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 RNU6-461P-201ENST00000364195 107 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 SNORA25B-201ENST00000365507 128 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 SNORA44-201ENST00000384584 132 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 RNA5SP323-201ENST00000391094 133 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 MIR1289-1-201ENST00000408836 144 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 AC003685.2-201ENST00000422795 395 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 CST9LP2-201ENST00000437612 320 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 AC091826.1-201ENST00000514065 313 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 SNORD33.1-201ENST00000516213 88 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 RNU6-504P-201ENST00000516568 104 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 RNU1-142P-201ENST00000516682 145 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 AL033523.1-201ENST00000605153 153 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRIM50Q86XT4 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
TRIM50Q86XT4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.85
TRIM50Q86XT4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM50Q86XT4 SNORA33-201ENST00000363664 130 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 SNORD114-6-201ENST00000364393 72 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 MIR624-201ENST00000385217 97 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 SNORD72-201ENST00000390994 80 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AL353689.1-201ENST00000438895 199 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AC021205.2-201ENST00000480069 347 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 Y_RNA.709-201ENST00000516952 92 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 RNU6-1270P-201ENST00000517128 108 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AL365205.2-201ENST00000594586 68 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AL365361.1-201ENST00000566942 3481 ntBASIC3.52□□□□□ -1.85
TRIM50Q86XT4 AC018630.2-201ENST00000534866 2403 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM50Q86XT4 RNU6-647P-201ENST00000364243 107 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 SNORA1-201ENST00000384107 130 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 SRIP3-201ENST00000413200 219 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 YWHAEP4-201ENST00000505390 198 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 RNU6-341P-201ENST00000516973 96 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 NDUFA5P6-201ENST00000542110 379 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
TRIM50Q86XT4 AC022217.4-201ENST00000604389 163 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM50Q86XT4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
TRIM50Q86XT4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM50Q86XT4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM50Q86XT4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM50Q86XT4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM50Q86XT4 MIR126-201ENST00000362291 85 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 949 ms