Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX53Q86TM3 AC107393.1-201ENST00000512403 346 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 AP002392.1-201ENST00000537692 208 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 AC005972.2-201ENST00000604690 348 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 MIR548AY-201ENST00000617669 107 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX53Q86TM3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
DDX53Q86TM3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
DDX53Q86TM3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RNU4-10P-201ENST00000364383 140 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RNU6-376P-201ENST00000384731 106 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RNA5SP467-201ENST00000391274 118 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 AL135786.1-201ENST00000415892 214 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 Z98742.3-201ENST00000418637 326 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RPL36AP21-201ENST00000490372 323 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 RN7SL636P-201ENST00000497504 294 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX53Q86TM3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX53Q86TM3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX53Q86TM3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX53Q86TM3 RNU7-115P-201ENST00000516433 55 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 AC022559.1-201ENST00000520905 205 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
DDX53Q86TM3 MIR3169-201ENST00000578032 83 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 AL353149.1-201ENST00000610667 244 ntBASIC2.69□□□□□ -1.98
DDX53Q86TM3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
DDX53Q86TM3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
DDX53Q86TM3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 RNU4-13P-201ENST00000364019 141 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 RNU6-918P-201ENST00000391219 106 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 EBAG9P1-201ENST00000418955 543 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.68□□□□□ -1.98
DDX53Q86TM3 AC100767.1-201ENST00000528178 123 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 MIR4308-201ENST00000580634 81 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 POLR3GP1-201ENST00000594073 261 ntBASIC2.68□□□□□ -1.98
DDX53Q86TM3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.68□□□□□ -1.98
DDX53Q86TM3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
DDX53Q86TM3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX53Q86TM3 SNORA33-201ENST00000363664 130 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 RNU6-209P-201ENST00000384118 107 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 MIR29C-201ENST00000385231 88 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 SNORA40.19-201ENST00000390846 128 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AL117342.1-201ENST00000404861 406 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 RNA5SP425-201ENST00000410336 112 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 COX6CP10-201ENST00000416832 224 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 BX510359.4-201ENST00000423750 193 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AL162725.1-201ENST00000435405 301 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.67□□□□□ -1.98
DDX53Q86TM3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX53Q86TM3 AC007229.1-201ENST00000590455 412 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AC073413.2-201ENST00000604332 360 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 AP003357.1-201ENST00000604497 148 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 FTX_2.1-201ENST00000618816 94 ntBASIC2.67□□□□□ -1.98
DDX53Q86TM3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX53Q86TM3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
DDX53Q86TM3 RNU1-58P-201ENST00000362413 163 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 RNU6-862P-201ENST00000362804 105 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 RNU1-96P-201ENST00000364163 162 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 MIR548I3-201ENST00000408378 149 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 MIR548I1-201ENST00000408810 149 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 SNORA36B-201ENST00000410438 131 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX53Q86TM3 RNU7-120P-201ENST00000459334 63 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX53Q86TM3 RPS29P21-201ENST00000496272 170 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 RNA5SP137-201ENST00000516833 135 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX53Q86TM3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.66□□□□□ -1.98
DDX53Q86TM3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX53Q86TM3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX53Q86TM3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DDX53Q86TM3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
DDX53Q86TM3 Y_RNA.270-201ENST00000364693 104 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 RNU4-17P-201ENST00000365598 141 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX53Q86TM3 snoU13.15-201ENST00000459407 104 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 RNU7-116P-201ENST00000516940 62 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 RNU7-128P-201ENST00000517247 62 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 AC021269.2-201ENST00000532318 330 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
DDX53Q86TM3 AC127455.1-201ENST00000565496 145 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 AL359075.3-201ENST00000613288 217 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.65□□□□□ -1.99
DDX53Q86TM3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX53Q86TM3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX53Q86TM3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX53Q86TM3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
DDX53Q86TM3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX53Q86TM3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 SNORA8.3-201ENST00000384679 139 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms