Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 U6.73-201ENST00000619194 103 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 SNORA63.4-201ENST00000362763 126 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 RNU6-476P-201ENST00000384726 107 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 MIR95-201ENST00000385072 81 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 MTND5P34-201ENST00000568888 325 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 AC131055.1-201ENST00000584626 316 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 JPX_2.1-201ENST00000614161 69 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 MIR622-201ENST00000638396 96 ntBASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RNF111Q6ZNA4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 MIR491-201ENST00000384877 84 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 MIR562-201ENST00000384894 95 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 AL031121.1-201ENST00000406553 254 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 RNU2-48P-201ENST00000410694 191 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 RPL23AP83-201ENST00000434984 473 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 OR9P1P-201ENST00000496431 281 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 RNU5E-3P-201ENST00000515913 68 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 SNORA48.11-201ENST00000517015 89 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 AL355297.2-201ENST00000604792 129 ntBASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RNF111Q6ZNA4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 SNORA9-201ENST00000384215 133 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AL158147.1-201ENST00000443970 75 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AC233266.1-201ENST00000454518 96 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 RN7SKP57-201ENST00000517248 293 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AC097639.2-201ENST00000603159 172 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AC242852.1-201ENST00000612151 96 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 AC244015.1-201ENST00000622301 99 ntBASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF111Q6ZNA4 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 RNU6-508P-201ENST00000363231 103 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 SNORD18B-201ENST00000365659 72 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 RNY4P18-201ENST00000391107 89 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 SNORA26-201ENST00000391286 122 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 RNU2-63P-201ENST00000410792 194 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 RN7SL297P-201ENST00000483161 293 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 AC011406.1-201ENST00000512440 370 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.690-201ENST00000516603 95 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 AC133485.4-201ENST00000561835 220 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 AC138907.4-201ENST00000570107 226 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 MIR3914-2-201ENST00000637339 95 ntBASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF111Q6ZNA4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 AC108206.1-201ENST00000570186 4159 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 MIR520G-201ENST00000385064 90 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 SNORA40.5-201ENST00000391061 128 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 PDCD5P2-201ENST00000507570 312 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 SNORA18.4-201ENST00000516440 124 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 RNU6-667P-201ENST00000517186 102 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 RNU2-60P-201ENST00000517290 128 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 MIR3121-201ENST00000579680 77 ntBASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RNF111Q6ZNA4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms