Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.422-201ENST00000384054 114 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.455-201ENST00000384230 98 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AL355796.1-201ENST00000406706 323 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 RNA5SP100-201ENST00000410903 110 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 RNA5SP59-201ENST00000410922 110 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 RNU6-1199P-201ENST00000411249 104 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AL390729.2-201ENST00000416137 156 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.33□□□□□ -2.2
ZNF544Q6NX49 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 RNU6-1137P-201ENST00000517073 99 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.33□□□□□ -2.2
ZNF544Q6NX49 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC113195.1-201ENST00000579952 141 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC005176.2-201ENST00000596933 147 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC124312.5-201ENST00000604451 268 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC010900.2-201ENST00000604508 210 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 AC022441.3-201ENST00000605737 136 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 U6.115-201ENST00000636045 103 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RNU6-862P-201ENST00000362804 105 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.183-201ENST00000363882 113 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 SNORA72.2-201ENST00000365028 127 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RNU6-639P-201ENST00000384074 107 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.439-201ENST00000384119 94 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 SNORA20B-201ENST00000384220 132 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.471-201ENST00000384312 102 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RNU6-985P-201ENST00000410182 104 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RNU6-101P-201ENST00000410323 104 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.676-201ENST00000516393 96 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 RNU7-128P-201ENST00000517247 62 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 AL355297.3-201ENST00000604082 446 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 AC069114.2-201ENST00000604699 304 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.812-201ENST00000610788 101 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.784-201ENST00000613803 101 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.787-201ENST00000616522 101 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.780-201ENST00000617336 101 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.801-201ENST00000619005 101 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 U6.73-201ENST00000619194 103 ntBASIC1.32□□□□□ -2.2
ZNF544Q6NX49 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ZNF544Q6NX49 SNORA27.1-201ENST00000362604 124 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 SNORA63-201ENST00000363450 132 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU6-1019P-201ENST00000364424 107 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU6-338P-201ENST00000383888 105 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.389-201ENST00000383924 113 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU6-417P-201ENST00000384712 107 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 MIR873-201ENST00000401120 77 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU5A-5P-201ENST00000411054 116 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.31□□□□□ -2.2
ZNF544Q6NX49 MRPS10P1-201ENST00000448483 130 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AL137100.2-201ENST00000555786 315 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AC136932.1-201ENST00000574771 208 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.31□□□□□ -2.2
ZNF544Q6NX49 RAC1P9-201ENST00000604990 392 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.31□□□□□ -2.2
ZNF544Q6NX49 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.3□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.164-201ENST00000363709 102 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNU6-450P-201ENST00000364654 107 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.446-201ENST00000384178 104 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 SNORD115-46-201ENST00000390982 71 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 MIR1253-201ENST00000408273 105 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AC069257.2-201ENST00000441819 155 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNA5SP57-201ENST00000459463 123 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AC025465.3-201ENST00000510570 311 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNU7-99P-201ENST00000516271 62 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNU6-764P-201ENST00000516396 105 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
ZNF544Q6NX49 MIR5094-201ENST00000578766 85 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AL359075.3-201ENST00000613288 217 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 AC040896.1-201ENST00000613819 479 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
ZNF544Q6NX49 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RNU1-22P-201ENST00000363334 158 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.153-201ENST00000363615 91 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 SNORA33-201ENST00000363664 130 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms