Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RNU6-341P-201ENST00000516973 96 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 AP003072.1-201ENST00000531740 145 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 AC136932.1-201ENST00000574771 208 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 MIR4709-201ENST00000577272 72 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 AL162424.1-201ENST00000602325 221 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 MIR376A1-201ENST00000616574 68 ntBASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 JTBP1-201ENST00000441314 247 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 AL606517.2-201ENST00000442855 241 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 UBE2DNL-203ENST00000474922 222 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 RNU6-1046P-201ENST00000516538 107 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 SNORA40.15-201ENST00000516884 107 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 MIR4300-201ENST00000581016 96 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 AC091178.2-201ENST00000584401 117 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 MIR4719-201ENST00000585233 84 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.812-201ENST00000610788 101 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.784-201ENST00000613803 101 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.787-201ENST00000616522 101 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.780-201ENST00000617336 101 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 Y_RNA.801-201ENST00000619005 101 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 MIR8054-201ENST00000620877 86 ntBASIC1.68□□□□□ -2.14
LRIF1Q5T3J3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 SNORD81.1-201ENST00000363064 77 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 RNU6-397P-201ENST00000516226 104 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 RNU6-1137P-201ENST00000517073 99 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 AC131281.1-201ENST00000522984 164 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 AC006504.6-201ENST00000590142 199 ntBASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.67□□□□□ -2.14
LRIF1Q5T3J3 RNU6-770P-201ENST00000363929 105 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 MIR23A-201ENST00000385245 73 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 RNU6-440P-201ENST00000390882 105 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 AL590004.1-201ENST00000405321 300 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 MIR1267-201ENST00000408723 78 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 AL162725.1-201ENST00000435405 301 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 SNORA31.10-201ENST00000516482 106 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 AC091544.4-201ENST00000555268 342 ntBASIC1.66□□□□□ -2.14
LRIF1Q5T3J3 SNORD113-8-201ENST00000363497 74 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 RNU4-30P-201ENST00000410245 143 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AC091021.1-201ENST00000468051 388 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AP002004.2-201ENST00000531656 154 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 MIR4648-201ENST00000580107 72 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 AL929325.1-201ENST00000603096 117 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.65□□□□□ -2.15
LRIF1Q5T3J3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNU4-90P-201ENST00000362773 141 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 U8.2-201ENST00000363156 134 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNA5SP511-201ENST00000410487 115 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AL161935.2-201ENST00000414627 60 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 ELOCP20-201ENST00000422460 345 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 POLR2KP2-201ENST00000438155 177 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNU7-34P-201ENST00000459394 64 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 HMGN1P10-201ENST00000474557 553 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNU6-496P-201ENST00000516145 99 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 RNU6-63P-201ENST00000516690 95 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AC110588.1-201ENST00000559699 137 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
LRIF1Q5T3J3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.63□□□□□ -2.15
LRIF1Q5T3J3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LRIF1Q5T3J3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.63□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.210-201ENST00000364161 110 ntBASIC1.63□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.63□□□□□ -2.15
LRIF1Q5T3J3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms