Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC38Q502W7 Y_RNA.183-201ENST00000363882 113 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 SNORA33.2-201ENST00000365413 134 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 Y_RNA.455-201ENST00000384230 98 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 RN7SKP200-201ENST00000410564 320 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC38Q502W7 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
CCDC38Q502W7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC38Q502W7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC38Q502W7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC38Q502W7 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 MIR1267-201ENST00000408723 78 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC38Q502W7 AC008834.1-201ENST00000511612 175 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 MIR4680-201ENST00000580906 66 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 AC091178.2-201ENST00000584401 117 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 RAC1P9-201ENST00000604990 392 ntBASIC1.96□□□□□ -2.1
CCDC38Q502W7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC38Q502W7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CCDC38Q502W7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CCDC38Q502W7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC38Q502W7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNA5SP432-201ENST00000362480 116 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 MIR520G-201ENST00000385064 90 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNU6-710P-201ENST00000410424 105 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 AC091021.1-201ENST00000468051 388 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNU6-397P-201ENST00000516226 104 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 SNORA31.10-201ENST00000516482 106 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNU6-341P-201ENST00000516973 96 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 RNU6-897P-201ENST00000517135 105 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC38Q502W7 AL929325.1-201ENST00000603096 117 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 AL355297.3-201ENST00000604082 446 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 SNORD113-5-201ENST00000607261 78 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC38Q502W7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC38Q502W7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCDC38Q502W7 AC092881.1-201ENST00000638218 2733 ntBASIC1.95□□□□□ -2.1
CCDC38Q502W7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC38Q502W7 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 RNU6-639P-201ENST00000384074 107 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 Y_RNA.527-201ENST00000384573 102 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 RNU7-34P-201ENST00000459394 64 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 SEPT14P8-201ENST00000508026 178 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 RNU6-1046P-201ENST00000516538 107 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC38Q502W7 AC136932.1-201ENST00000574771 208 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 AC024614.2-201ENST00000577584 372 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 SNORA77B-201ENST00000578179 125 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 AC113195.1-201ENST00000579952 141 ntBASIC1.94□□□□□ -2.1
CCDC38Q502W7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC38Q502W7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC38Q502W7 SNORD81.1-201ENST00000363064 77 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 RNU4-30P-201ENST00000410245 143 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC38Q502W7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC38Q502W7 RNU6-63P-201ENST00000516690 95 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 AL162424.1-201ENST00000602325 221 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 MIR376A1-201ENST00000616574 68 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 AC100821.1-201ENST00000523153 2479 ntBASIC1.93□□□□□ -2.1
CCDC38Q502W7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 AC024067.1-201ENST00000426199 223 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 AL162725.1-201ENST00000435405 301 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 MIR4300-201ENST00000581016 96 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 AC022140.2-201ENST00000623500 188 ntBASIC1.92□□□□□ -2.1
CCDC38Q502W7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC38Q502W7 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 Y_RNA.152-201ENST00000363578 100 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 Y_RNA.276-201ENST00000364732 109 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 Y_RNA.422-201ENST00000384054 114 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 MIR194-1-201ENST00000384892 85 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 SNORD115-46-201ENST00000390982 71 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AL034345.1-201ENST00000407768 123 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 RNA5SP511-201ENST00000410487 115 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AL161935.2-201ENST00000414627 60 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC38Q502W7 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 SNORA40.15-201ENST00000516884 107 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AC131281.1-201ENST00000522984 164 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AP002004.2-201ENST00000531656 154 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 AL442663.2-201ENST00000554385 511 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms